Gene Dshi_3260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_3260 
SymbolmotA 
ID5712317 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp3426856 
End bp3427725 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content61% 
IMG OID641269188 
Productflagellar motor protein MotA 
Protein accessionYP_001534594 
Protein GI159045800 
COG category[N] Cell motility 
COG ID[COG1291] Flagellar motor component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATTGGAA TTATCGGAAT AGTCGTTGTC TTCGTCATGG TCTTCGGGGG TTATCTCGCG 
GCTGGCGGCA AGATGGGCAT CATCCTGAAA TCCCTGCCGT TCGAGATGAC GATGATCGGG
GGCGCCGCGG TGGGTGCCTT CGTGATCGGC AACGACATGA GTGGCATCAA GCACACGCTC
AAGGACGTCA AGAAGGTGTT CAAGGGGCCG ACCTGGCTGG CGCAGGACTA CAAGGACCTC
TTGTGCCTGC TGTTCGAACT CATCCGGCTG GCGCGCCAGA ACCCGGTGGG GCTCGAAGAG
CATATCGAGG ATCCCGCGGC CTCCAATATC TTCTCGAAGT ATCCCAAGAT CATGGCGGAC
CGCGAAGCGA TCGACCTGAT CGCCGACACC ATGCGCAGCG CGGCGATGAA TTACGACGAC
CCTCACCAGG TCGAGGAAGT TCTGGAGAAA CGGATCGAGT CCAATCACGA GCATGCCATG
CATGGCAGCC ACGCGCTGCA GACCGTCGCG GACGGCCTGC CCGCCCTCGG CATCGTCGCG
GCCGTTCTCG GCGTGATCAA GACCATGGGC TCCATCGACC AGCCGCCCGA GATCCTCGGC
AAACTCATCG GCGGGGCGCT CGTCGGCACC TTTCTGGGGG TGTTCCTGGC CTACGGTCTC
GTCGGGCCGT TCTCGGCCAA GGTCAAATCC GTGGTCGAGG AAGACGCGCA TTTCTACCTG
CTGATTCGCG AGGTTCTCGT CGCCAACCTG CACAAGCACA CGGTCAACAA CTGTATCGAA
GTGGGCCGTC AGAACACGCC CAGCCACATC CGCCCGACCT TCTCTGACCT CGAAGAGGCG
CTCAAGCAAC TCAAGCAGGA GGCCGCATGA
 
Protein sequence
MIGIIGIVVV FVMVFGGYLA AGGKMGIILK SLPFEMTMIG GAAVGAFVIG NDMSGIKHTL 
KDVKKVFKGP TWLAQDYKDL LCLLFELIRL ARQNPVGLEE HIEDPAASNI FSKYPKIMAD
REAIDLIADT MRSAAMNYDD PHQVEEVLEK RIESNHEHAM HGSHALQTVA DGLPALGIVA
AVLGVIKTMG SIDQPPEILG KLIGGALVGT FLGVFLAYGL VGPFSAKVKS VVEEDAHFYL
LIREVLVANL HKHTVNNCIE VGRQNTPSHI RPTFSDLEEA LKQLKQEAA