Gene Dshi_3253 details

Gene Information

• Locus tag: Dshi_3253
• Symbol: flgA
• ID: 5712310
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dinoroseobacter shibae DFL 12
• Kingdom: Bacteria
• Replicon accession: NC_009952
• Strand: +
• Start bp: 3418989
• End bp: 3419414
• Gene Length: 426 bp
• Protein Length: 141 aa
• Translation table: 11
• GC content: 71%
• IMG OID: 641269181
• Product: flagellar basal body P-ring biosynthesis protein FlgA
• Protein accession: YP_001534587
• Protein GI: 159045793
• COG category: [N] Cell motility; [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG1261] Flagellar basal body P-ring biosynthesis protein
• TIGRFAM ID: [TIGR03170] flagella basal body P-ring formation protein FlgA

Plasmid Coverage information

• Num covering plasmid clones: 34
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 42
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGACCCGTT GGCTGATTCT CTCCCTCGCT GTCCTGATGG GCGTGCCGGC CGCCGCAGAG 
ACCCTGGTGG CCGCGCGGAC CATCCGGGCC CAGGCCATCC TGACGGCGGA GGACCTGAAC 
CTGACCCCGG GCAGCACGCC GGGGGCGCTG AGCCGTCCCG AAGAGGCGAT CGGGCTGGAG 
AGTCGCGTGA TCCTTTATGC CGGGCGCCCG ATCCTGGCCG ACCAGGTCGG TCCCCCGGCC 
CTGGTGGAGC GCAACGAGCT CGTCTCGCTG GTCTACGCCA CGCCCTTCAT GCGGATCGCG 
ACCGAGGGGC GGGCCCTGGG GCGCGCGGGG CTCGGAGAGT CCCTGCGGGT GCTGAACATT 
TCCTCCAAGA CCACTGTCCG CGCCCGGGTC ACCGGGCCCG GCCAAGCCAT TGTCGAAACC 
CCCTGA 

 

Protein sequence

MTRWLILSLA VLMGVPAAAE TLVAARTIRA QAILTAEDLN LTPGSTPGAL SRPEEAIGLE 
SRVILYAGRP ILADQVGPPA LVERNELVSL VYATPFMRIA TEGRALGRAG LGESLRVLNI 
SSKTTVRARV TGPGQAIVET P