| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3242 |
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| Symbol | |
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| ID | 5712299 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 3410436 |
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| End bp | 3411863 |
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| Gene Length | 1428 bp |
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| Protein Length | 475 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641269170 |
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| Product | protein of unknown function DUF404 |
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| Protein accession | YP_001534576 |
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| Protein GI | 159045782 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2308] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.657698 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGATAA AGCAGCCCTT TGACGAGATG ACGGGCATGG GGGACGGCGC GATCCGGTCC
CCGTATGCAG ATTTTGACAC CTGGTTCAGC GGCGAGGACC CCGCCCGCCT GCGCAAGAAG
GCCCGCGAAG CCGAAGACGT TTTCCGGCTG ACGGGGATCA CCTTCAACGT CTATGGGCGC
GAAGAGGCGG CCGAACGGCT CATTCCCTTC GACATCGTGC CGCGCATCAT CTCGGCCCGG
GAATGGACCC GGCTGGCCAA GGGGATCGAG CAGCGGGTGC GCGCGATCAA CGCCTTTCTG
CACGACATCT ATCACCGGCA GGAGATCATC CGCGCGGGCC GCATACCCGC CGAGATGATC
GCCAATAACG AGGCGTTCCT GCCCCAGATG ATCGGCATGA CGCCGCCGGG CAATGTCTAT
ACCCATATCG TCGGCATCGA CCTGGTGCGC ACCGGCGAGG ACGAGTTCTA CGTGCTGGAG
GACAATGCGC GTACGCCTTC GGGGGTCTCC TACATGCTGG AGAACCGGGA GACGATGCTG
CAGATGTTCC CGGAGCTGTT CGCGCGCAAC CGGGTGCGGT CGGTCAGCGA GTACCCGCAA
AACCTGCGCC GGTCGTTGAG CGACTGTTTC CCGCCGGCCT GTACCGGCAA GCCGGTGGTG
GGGGTTCTGA CCCCGGGGAT CCACAACTCG GCCTATTACG AGCATGCGTT TCTCGCCGAC
AAGATGGGCG CGGCACTGGT GGAGGGGCAT GACCTGAAGG TGGTGGACGG GCGCGTGGCG
ATGCGGACCA CCCGCGGCTT CACCCCGATC GACGTGCTCT ACCGGCGGGT GGATGACGAT
TTCCTCGACC CGATGAATTT CAGGCCCGAG AGCCTGCTGG GCGTGCCGGG TATCATGGAT
GTCTACCGCG CGGGCGGGAT CACCATCGCC AACGCCCCGG GCACCGGGAT CGCGGACGAC
AAGGCGATCT ATTCCTACAT GCCGGAGATC GTCGAGTTCT ATACCGGCGA GCAGGCGATC
CTGAAGAACG TGCCGACCCA TCGCTGCAAC GACCCCGACA CGCTGGCCTA TGTTCTGGAC
AATCTGGCCG ACTTGGTGGT CAAGGAGGTG CATGGCTCGG GCGGCTACGG GATGCTGGTG
GGGCCTGCGG CCTCGAAAAA GGAGATCGCC GCCTTCCGCG AGAAGCTGAT CGCCAAGCCC
GACAGCTATA TCGCCCAGCC GACGCTGAGC CTGAGCACGG TGCCGATTTT CGCGCGTTCG
GGGCTGGCGC CGCGGCATGT GGATTTGCGG CCCTTCGTGC TGGTCTCGCC AAAGAAGATC
CATATCACGC CCGGCGGGCT GACGCGGGTG GCGTTGCAGA AGGGGTCGCT GGTGGTCAAT
TCGAGCCAGG GAGGCGGCAC CAAGGACACC TGGGTGCTGG AGGAGTAG
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| Protein sequence | MKIKQPFDEM TGMGDGAIRS PYADFDTWFS GEDPARLRKK AREAEDVFRL TGITFNVYGR
EEAAERLIPF DIVPRIISAR EWTRLAKGIE QRVRAINAFL HDIYHRQEII RAGRIPAEMI
ANNEAFLPQM IGMTPPGNVY THIVGIDLVR TGEDEFYVLE DNARTPSGVS YMLENRETML
QMFPELFARN RVRSVSEYPQ NLRRSLSDCF PPACTGKPVV GVLTPGIHNS AYYEHAFLAD
KMGAALVEGH DLKVVDGRVA MRTTRGFTPI DVLYRRVDDD FLDPMNFRPE SLLGVPGIMD
VYRAGGITIA NAPGTGIADD KAIYSYMPEI VEFYTGEQAI LKNVPTHRCN DPDTLAYVLD
NLADLVVKEV HGSGGYGMLV GPAASKKEIA AFREKLIAKP DSYIAQPTLS LSTVPIFARS
GLAPRHVDLR PFVLVSPKKI HITPGGLTRV ALQKGSLVVN SSQGGGTKDT WVLEE
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