| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3240 |
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| Symbol | asd |
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| ID | 5712297 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 3407961 |
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| End bp | 3408983 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641269168 |
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| Product | aspartate-semialdehyde dehydrogenase |
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| Protein accession | YP_001534574 |
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| Protein GI | 159045780 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0136] Aspartate-semialdehyde dehydrogenase |
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| TIGRFAM ID | [TIGR01296] aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.207886 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCTACA AAGTCGTCGT CGTCGGGGCC ACGGGAAACG TGGGCCGCGA AATGCTGAAC
ATCCTGGCCG AGCGCCAGTT CCCGGTGGAC GAGATCGCCG TTCTGGCGTC TCGCAAATCC
CTGGGCACCG AGGTGAGCTT TGGCGACAAG ACCTTGAAAA CAAAGGATCT CGACACGTTC
GACTTCACCG GCTGGGACAT CGCGTTCTTC GCCGTGGGCT CCACCGCGAC CAAGGAATAC
GCCCCCAGGG CGGCCGCAGC GAAATGCGTG GTGATCGACA ACTCCTCGCT CTATCGCTAC
GACCCGCAGA TCCCGCTGGT GGTGCCCGAG GTGAACCCCG AGGCGGTCGA GGATTACAAG
AACAAATACA TCATCGCGAA CCCCAACTGC TCCACCGCGC AGATGGTCGT CGCCCTCAAG
CCGCTGCACG ACCGCGCCCG GATTAAACGT GTTGTTGTAA GCACTTACCA GTCCGTCTCC
GGTACCGGCA AGGAGGCGAT CGACGAGCTT TGGGACCAGA CCAAGGGCAT GTACGTCCCC
GGCCAGGAAA AGGCGCCGTC GGTCTACCCC AAGCAGATCG CCTTCAACGT CATCCCCCAT
ATCGACGTGT TCCTGGAGGA CGGCTCCACC AAGGAAGAAT GGAAGATGGT CGCCGAGACC
AAGAAGATCG TCGACCCGGC GATCAAGGTC ACGGCAACCT GCGTCCGCGT ACCTGTTTTC
GTGGGCCATT CCGAGGCGAT CAATATCGAG TTCGAAGAGT TCATCGACGA AGACGAGGTC
CGCGACATCC TCCGCGAAGC GCCGGGCATC ATGGTCGTCG ACAAGCGCGA AGACGGCGGC
TACGTCACCC CGGTGGAATG CGTCGGCGAC TTCGCAACCT TCATCAGCCG CATCCGCCAG
GACAGCACGA TCGACAATGG CATAAACCTG TGGTGCGTGT CCGACAACCT GCGCAAGGGC
GCGGCCCTGA ACGCGGTGCA GATCGCCGAA ACCCTCGGAA ACCGGGTCCT GAAGAAGGGT
TGA
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| Protein sequence | MGYKVVVVGA TGNVGREMLN ILAERQFPVD EIAVLASRKS LGTEVSFGDK TLKTKDLDTF
DFTGWDIAFF AVGSTATKEY APRAAAAKCV VIDNSSLYRY DPQIPLVVPE VNPEAVEDYK
NKYIIANPNC STAQMVVALK PLHDRARIKR VVVSTYQSVS GTGKEAIDEL WDQTKGMYVP
GQEKAPSVYP KQIAFNVIPH IDVFLEDGST KEEWKMVAET KKIVDPAIKV TATCVRVPVF
VGHSEAINIE FEEFIDEDEV RDILREAPGI MVVDKREDGG YVTPVECVGD FATFISRIRQ
DSTIDNGINL WCVSDNLRKG AALNAVQIAE TLGNRVLKKG
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