Gene Dshi_3239 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_3239 
Symbol 
ID5712296 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp3407481 
End bp3407954 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content68% 
IMG OID641269167 
Producthypothetical protein 
Protein accessionYP_001534573 
Protein GI159045779 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.260816 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGACA CCCGCATCGA AATCCGACTG CCCGACCCGC TGCGCACAGC CGCCGAAACG 
GTCGCGTCCG CGGAAGACAT CTCGCTGGGG CAATTGATCC GTGACGCGTT GCGCGCGGAA
ATTGCGCGGC GAAACCGAAA ACACGCGAAG ACGCCCACAA GGGCGGATGA GCGGCTCCTC
GCACCCTTGC GGGTGCTCCT CGCCAATGAC CTTGCCGAAG CGCGGGGATG GGAAGAGCTG
CAAAACCGGC TTCGGGCGAA GGGATACAGC TTGCAGGAAG CCGGGGGCGG ACTGGCCCTG
CACAGCTGGC CCGACGGCGC GCGCCAGTGC AAAGGCTCCG ATCTGGGCTA CAGCTATGCA
ACCCTGATGC GCCGTTTCGG CCAGCCCTTC CCGAGCCACA GCCACCGGTG GCCGGCCGAG
CGGGTGATGA GGCGTGCCGA GCAGGACATG CCATCCGCGC GCCCGGGGCG CTGA
 
Protein sequence
MADTRIEIRL PDPLRTAAET VASAEDISLG QLIRDALRAE IARRNRKHAK TPTRADERLL 
APLRVLLAND LAEARGWEEL QNRLRAKGYS LQEAGGGLAL HSWPDGARQC KGSDLGYSYA
TLMRRFGQPF PSHSHRWPAE RVMRRAEQDM PSARPGR