| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3231 |
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| Symbol | |
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| ID | 5712288 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 3399663 |
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| End bp | 3401321 |
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| Gene Length | 1659 bp |
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| Protein Length | 552 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 641269159 |
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| Product | putative DNA repair enzyme |
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| Protein accession | YP_001534565 |
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| Protein GI | 159045771 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCACCGG CACGCCGTAT CCTCGCCCTG TGGTTTCCCC GTCTCGGGGC CGAACGCGCC
CTGCGCATCG CCCGCCTGAT CGAACCGGGC CCGTTCGCCA CGGTCGCCGA ACAGGGGGCA
GCCCAGGTGC TCGACAGCCT CTCGATCGCG GCCAGCGAGA GGGGGTTGCA GCCGGGCCAA
CCCCTGCGCG ACGCCCAGGC GATCTGCCCC GCCCTGCTGA CCCGCCCCGC CGACCCGCCG
GGGGAGGCCG CGTTTCTCGC CGCCCTGCGC CGCTGGGCGG GCAAGGTCTC CCCCTGGGTG
GCGGCGCAAC CGGACAACAC CCTGGTGATC GACCTGACCG GCTGCGCCCA TCTCTTTGGC
GGCGAGGCCG AGGTGATCGC GCTGATGGAA CGGGACTGCG CCGATATGGG GCTGAGCGTG
CGCGCCGGGC TCGCCGACAG CCTCGGCGGG GCCTGGGCGC TGGCCCATTA CGCGGGCCGC
CGCCTCGACC CGGTGCGCAG CGGCGACGCC ATCGACCAGG AGGCGCGCGC GACCCGCTCC
CGCGCGACCA AGCGGCGGCA CTGGACCCGG GGCGGCACCG CCCCGCGCGC CGACCTCGCC
CCGGCAGAAG TCGCTCGCAT CGCGCCGCCC GGGCGCATCC GGCAGGCCCT GAACCCCCTG
CCCGTGGCCG CCCTGCGGCT CGCACCGGAG ACCGAGACCG GGCTGGCGCG GGTCGGATTG
CGCCGGATCG AGGACCTGAC CGGCCTGCCG CGCGCGGCCC TGGCCCGCCG CTTCGGGCTG
CAGGTCGCCC GACGGCTCGA CCAGGCCCTC GGGCTGGAGC CCGAGCCCGT CTCCCCCGCC
GCGCCGGATG CGGTCTTTGC GGTGCGCCTG ACCCTGCCCG ATCCCATCGG GCTGATCGAG
GACCTGACCG CAGGAATCGA CCGGCTGCTG CCGCCCCTGG GGGACAAGCT GGCCGCGGCG
GGGCGCGGGG CGCGGCGGCT GCGGCTGGAG CTGTTGCGCT GCGATCAGAC CCGGCAGAGC
TTCGATCTGG GCCTGGCGCA CCCCTCGGCG GACCCGGCGC GGCTGCGCCC CCTGATCCTG
CAGAAACTGG ACGAGGCCGA GGCCGGGTTC GGCATCGACG TGATCCGGCT GGAGGCGGTG
CAGACCGAGC CGGTCCAGGC CGCCCAGCAT GCGGGGCACC TGGAAGCCAC CCGCGCCGCC
AAGGCCGGAC GGACGCGCAC GGCGCTGGAC GACCTGCTCG GCACGCTGGG CGCCCGGATC
GGGCTGGAGG CGATCACCCG CTGGCACCCC GCCGACAGCC ATATCCCCGA AAAAGGCGCC
ACGGTGCTCT CGGCGGCCTG GTCCGCGGCC CATGACGGCG ACTGGCCGGG CAGCGACCGG
CCCCGGCCCC TGACCCTGTT TGCCCCCGAG CCCGTCCATG CCCCCCAGGA CCCGACCCCG
CCCGCCCGGT TCCGCTGGCG CGGCCAGACA CTGGAGCTGG GCCGGGCCGA GGGGCCCGAA
CGGCTGGCCC CGGAATGGTG GCTGGACGAT CCCAACTGGC GCAGCGGCGT GCGCGACTAC
TGGCGGGTGG AGACCGGCGA CGGACGACGG CTGTGGCTGT TCTACGCCCA TGGCGGCGCC
CTGTCCGCGG GCTGGTTCTG CCAGGGGCAG TTCGCCTGA
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| Protein sequence | MSPARRILAL WFPRLGAERA LRIARLIEPG PFATVAEQGA AQVLDSLSIA ASERGLQPGQ
PLRDAQAICP ALLTRPADPP GEAAFLAALR RWAGKVSPWV AAQPDNTLVI DLTGCAHLFG
GEAEVIALME RDCADMGLSV RAGLADSLGG AWALAHYAGR RLDPVRSGDA IDQEARATRS
RATKRRHWTR GGTAPRADLA PAEVARIAPP GRIRQALNPL PVAALRLAPE TETGLARVGL
RRIEDLTGLP RAALARRFGL QVARRLDQAL GLEPEPVSPA APDAVFAVRL TLPDPIGLIE
DLTAGIDRLL PPLGDKLAAA GRGARRLRLE LLRCDQTRQS FDLGLAHPSA DPARLRPLIL
QKLDEAEAGF GIDVIRLEAV QTEPVQAAQH AGHLEATRAA KAGRTRTALD DLLGTLGARI
GLEAITRWHP ADSHIPEKGA TVLSAAWSAA HDGDWPGSDR PRPLTLFAPE PVHAPQDPTP
PARFRWRGQT LELGRAEGPE RLAPEWWLDD PNWRSGVRDY WRVETGDGRR LWLFYAHGGA
LSAGWFCQGQ FA
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