Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_3223 |
Symbol | |
ID | 5712279 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | + |
Start bp | 3392688 |
End bp | 3393194 |
Gene Length | 507 bp |
Protein Length | 168 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641269150 |
Product | hypothetical protein |
Protein accession | YP_001534557 |
Protein GI | 159045763 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01764] DNA binding domain, excisionase family |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.190123 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 0.897241 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGAAGC GGTTCCCCGC CAATCGGATC AAGACCCACC GCATCTACAC GGTCTGGGAG GTTTCCGACG CGCTCGGGTG CCACAAGCAG ACGGTCGGGC GCTGGATCAG GTCCGGGGCG CTTGCAGCGG ACATGCGCAA GCGTCCTTGG CTCATCGACG GGCGCGATCT GAAGGCGTTT CTGGGCCAAC GGGTCGCTCG GCTCCGCTGC AAACTGGCGC TGCATCACTG CTACTGCCTT GGCTGCAAGG CACCTCAGGA ACCCGACGGC CGGATGGCGG ACTACGTCCA GCAGACCACG GAAACCGGGC AGCTCACAGG GATCTGCCCG GCCTGTGGCG CCCTCATGAA CAAGATGGTT AGGCGCGCCG ATCTGGAGGC CATCCGGGCC AAACTGGAGG TCACAATCCA ACAGGCCTCG CCAAGATTAG TGTCCCTTGA AGATCCCCGT TCAAATGTCA CCTCCACTAG GGAGCGCCGG ACCCATGGCA AGACGCAACA GCGATAA
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Protein sequence | MAKRFPANRI KTHRIYTVWE VSDALGCHKQ TVGRWIRSGA LAADMRKRPW LIDGRDLKAF LGQRVARLRC KLALHHCYCL GCKAPQEPDG RMADYVQQTT ETGQLTGICP ACGALMNKMV RRADLEAIRA KLEVTIQQAS PRLVSLEDPR SNVTSTRERR THGKTQQR
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