Gene Dshi_3203 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_3203 
SymbolallA 
ID5712259 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp3367958 
End bp3368452 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content65% 
IMG OID641269130 
Productureidoglycolatehydrolase 
Protein accessionYP_001534537 
Protein GI159045743 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG3194] Ureidoglycolate hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.742581 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.357363 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACCCA CCTTGAAAGC CGAACCGATC TCGCAGGCGG CCATCGCGGG CCTGGCCGAG 
CTGATCGAAG CCGAGGGCGC GGCGGACAAG CTGATCAACC AGGGGCTTTG CGGGCGCTTC
CATGATCGTG CCTCCCTCGA CATCGCGGGG GATGCGGGCA TCAGCGTATT CAAGTCGGCG
TCGTTCTCGC TGCCATACCG GATGGAGATG ATGGAGCGTC ACCCCCACGG CAGCCAGGCG
TTCCTGCCGA TGCAGGAGGG TACCTATCTC GTGGTGCTGG CCGAGGACAA GGCCGGCGCA
CCGCACAACC CGCGCGCCTT CATCGCCGGG CCGGGGCAGG GCGTGAACAT CGGGCGCAAT
GTCTGGCACG GGGTCTTGTG CCCCTTGTCG GACACACCGC CCCAGGCGGC CCTGTTCATG
GTTGTGGACC GCGTCACGGA CGGGCCGAAC CTGGAGGAGC ACTGGTTCGA CGAACCATAC
ACCATCGAAA AATAA
 
Protein sequence
MTPTLKAEPI SQAAIAGLAE LIEAEGAADK LINQGLCGRF HDRASLDIAG DAGISVFKSA 
SFSLPYRMEM MERHPHGSQA FLPMQEGTYL VVLAEDKAGA PHNPRAFIAG PGQGVNIGRN
VWHGVLCPLS DTPPQAALFM VVDRVTDGPN LEEHWFDEPY TIEK