Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_3203 |
Symbol | allA |
ID | 5712259 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | - |
Start bp | 3367958 |
End bp | 3368452 |
Gene Length | 495 bp |
Protein Length | 164 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641269130 |
Product | ureidoglycolatehydrolase |
Protein accession | YP_001534537 |
Protein GI | 159045743 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG3194] Ureidoglycolate hydrolase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.742581 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.357363 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACACCCA CCTTGAAAGC CGAACCGATC TCGCAGGCGG CCATCGCGGG CCTGGCCGAG CTGATCGAAG CCGAGGGCGC GGCGGACAAG CTGATCAACC AGGGGCTTTG CGGGCGCTTC CATGATCGTG CCTCCCTCGA CATCGCGGGG GATGCGGGCA TCAGCGTATT CAAGTCGGCG TCGTTCTCGC TGCCATACCG GATGGAGATG ATGGAGCGTC ACCCCCACGG CAGCCAGGCG TTCCTGCCGA TGCAGGAGGG TACCTATCTC GTGGTGCTGG CCGAGGACAA GGCCGGCGCA CCGCACAACC CGCGCGCCTT CATCGCCGGG CCGGGGCAGG GCGTGAACAT CGGGCGCAAT GTCTGGCACG GGGTCTTGTG CCCCTTGTCG GACACACCGC CCCAGGCGGC CCTGTTCATG GTTGTGGACC GCGTCACGGA CGGGCCGAAC CTGGAGGAGC ACTGGTTCGA CGAACCATAC ACCATCGAAA AATAA
|
Protein sequence | MTPTLKAEPI SQAAIAGLAE LIEAEGAADK LINQGLCGRF HDRASLDIAG DAGISVFKSA SFSLPYRMEM MERHPHGSQA FLPMQEGTYL VVLAEDKAGA PHNPRAFIAG PGQGVNIGRN VWHGVLCPLS DTPPQAALFM VVDRVTDGPN LEEHWFDEPY TIEK
|
| |