Gene Dshi_3195 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_3195 
SymbolnosD 
ID5712251 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp3360074 
End bp3361411 
Gene Length1338 bp 
Protein Length445 aa 
Translation table11 
GC content65% 
IMG OID641269122 
Productnitrous oxide maturation protein 
Protein accessionYP_001534529 
Protein GI159045735 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3420] Nitrous oxidase accessory protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.472641 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCCGTC TCCTGGTGCT CGCCGTGCTC CTGACCCTGT CGCTGCCCCT GGCCGCGGCA 
GAGCGACGGC TTGCGCCAGG GGCACCGGGC GACCTGCAAA CCGCCATCGC CGGGGCCAGT
CCCGGCGATG TGCTCATCCT AGCCCCCGGA CGCTATCCCG GGGCACTCCG GATCGACGTG
CCCGTTACCC TGACCGCCGA AGGAGGCGAG GCGATCATCG ACGGCCTCGG CCAGGGCACC
GCCGTGGAGA TCGCGGCCGA AGACGTCACG ATCCGCGGGC TGACGGTCAC CGGCTCCGGC
ATGAGCAGCA AGGACCTCGA CGCCGGGATC AAGATCCTGC GCAAGGCCCA CCGCGCCGTG
ATCACCCATA ACCGCGTGCT GGGAAACCTG CACGGCATCG ACATTCACGG CGGCCATGAC
GCCCTCGTCG CCCATAACGA GATCGTCGGC ACCCTCCAGC CGCGCCTGAA CGATCGCGGC
AACGGCATCT ATGTCTGGAA CAGTCCCGGC GCCGTGGTCG AGGGCAACTC CGTGCGCTAC
GGGCGCGACG GGATCTTCGC CAATACCTCG AAGAAGAACG TGTTCCGGAA CAACATCTTC
CGCGACCTGC GCTTTGCGGT ACACTACATG CACACCCATA ACAGCGAAGT GATCGGCAAT
GTCAGCATCG GCAATCGGCT GGGCTATGCC ATCATGTATT CCAACCGCGT GGTGGTGCGC
GACAATCTCA GCCTCGGCGA CCGCAACCAC GGCGTGATGC TGAACTTCTC CAACAACACC
GACGTGGCGA ACAACCTGGT GCGCGGCGGG TCCGAAAAAT GCCTGTTCAT CTATAACGCC
CACAAGAACC TGATCTATGA CAACCGGTTC GAAGGCTGCG ACATCGGCAT CCACTTCACC
GCCGGCTCCG AGCGCAACGT GCTGACCGGC AATGCGTTCA TCGGCAACCG CGAGCAGGTC
CGCTATGTCG GCACCAAGAC CGTGGAATGG AGCCATGAGG GTGCCGGGAA CTACTGGTCC
GATCACCCTG CCTATGACCT GAACGGCGAT GGCGCAGCCG ACAACGTCTT CCGGCCAAAC
GACCTGATGG ATCACATCCT GTGGTCGCAA CCGGCCGCGG CCCTCCTGCT GGGCGCGCCC
GCGGTGCAGC TCGTGCGCTG GTCGCAATCG TCCTTTCCCG CAACCTTGCC GGGCGGTGTC
GTCGACAGCC ACCCGGCCAT GACGCCCGTA ACCATTCCCG TGCCGGACGC GCTGCTGGCG
CTCGAAGCCG CCGCCGCCGG ACGCTGGGAC GAAGGAGACC AGGATGACTT CGATCCTGAA
AATTTCAACG CTCACTAA
 
Protein sequence
MVRLLVLAVL LTLSLPLAAA ERRLAPGAPG DLQTAIAGAS PGDVLILAPG RYPGALRIDV 
PVTLTAEGGE AIIDGLGQGT AVEIAAEDVT IRGLTVTGSG MSSKDLDAGI KILRKAHRAV
ITHNRVLGNL HGIDIHGGHD ALVAHNEIVG TLQPRLNDRG NGIYVWNSPG AVVEGNSVRY
GRDGIFANTS KKNVFRNNIF RDLRFAVHYM HTHNSEVIGN VSIGNRLGYA IMYSNRVVVR
DNLSLGDRNH GVMLNFSNNT DVANNLVRGG SEKCLFIYNA HKNLIYDNRF EGCDIGIHFT
AGSERNVLTG NAFIGNREQV RYVGTKTVEW SHEGAGNYWS DHPAYDLNGD GAADNVFRPN
DLMDHILWSQ PAAALLLGAP AVQLVRWSQS SFPATLPGGV VDSHPAMTPV TIPVPDALLA
LEAAAAGRWD EGDQDDFDPE NFNAH