| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3193 |
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| Symbol | nosR3 |
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| ID | 5712249 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 3355930 |
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| End bp | 3358116 |
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| Gene Length | 2187 bp |
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| Protein Length | 728 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641269120 |
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| Product | nitrous oxide reductase regulatory protein NosR |
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| Protein accession | YP_001534527 |
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| Protein GI | 159045733 |
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| COG category | [K] Transcription |
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| COG ID | [COG3901] Regulator of nitric oxide reductase transcription |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCCCC TACGATGGAT CGCCCATTTC CTCCTTCTGC TGACCCTGGC GATGCCCGCA
TGGGCCGACC CCGTTCTGCC CAGATACCTC GCCAAGACCC CCGCAGCCGA CCTCGTGCCC
GGTGCCGAGG GCTACGGCCC CATCCGCGAG GACGTGCCCG TAGCGCCAAT CCTCAAGGAT
GGCGAGGTCG CCGCCTGGGC TTTCATCACC TCTGATTTCG TCTCCACCAC CGGGTATTCG
GGAAAGCCCA TCGACGTACT CGTCGCGGTC GCCCCGGATG CCACGGTCAG CGCGGTCAGG
CTGGTCAAGC ATTCCGAACC CATCGTGCTG ATCGGTATCC CCGAATCCGA GATGCGTACC
CTGATCGAGG CCTATGCCGG GCTCGACCTC GTAGCCGAGG CGGAATCCGG CGGCACGGCC
CATGAGCTTG ATATCATCTC GGGCGCGACG GTGACGGTGA TGGTGATCGA CGACTCGATC
GTACGCTCCG GCCTGCGGGT GGCTCGCGCG CTTGGCCTCG GCGGGCTGGC CCCGCCCCCG
CCCGACACCG GCCCCGCCTT CGAGCTGGAT CTCGACGCCC CTGCCGCGCC GGACTGGATG
ACCCTGGAAG GCGACGGCAC CCTACGACGG CTGTCGTTGG ACGTGGGCCA GATCAACGCC
GCCTTCGCCA CCATGGGCGA TCCGCGTGCC GCCGAACGCG CCCTGACCCT GCCGCCCGAA
ACCACTTTCA TCGAAATGCA GACCGCGCTC GTCTCCCACC CGGCCATCGC CGCGTCGCTG
CTGGGCGAGG CCACGGCGCG CAACGTCGCC GACTGGCTGG AACCGGGCGA CCACGCCATC
GCGGTCTTCG GCCGCGGGCT CTACAGCTTC AAGGGCTCGG GCTATGTGCG CGGCGGCATC
TTCGACCGGA TCGTACTGAT TCAGGACGAG ATCTCGGTCC GCTTCCGCGA CCGGATGCAC
AAGCGCATCG TCTCGGTCGA GGCAGAGGGC GCCCCTGTCT TCGTGGAAGC CGACCTGTTC
AAGATCCCGG CCGACAGCGG CTTCGATCCT GCCGAGCCGT TCCGCATCCA GCTGCTGGTG
CAGCGCGAGG TTGGCCCGAT CGAGAAGGTC TTCACCACGT TCGACCTCGG CTACCAGTTG
CCGGCGGGCT ACTTGCGCGC CGTGACACCT CCAGCCGCGC CTGCGCCGTC CAACGCAGTC
AACGACCTGC TGGCACAGGA CGAAGCCGCG GCGCAGCAGG CGCTTTGGAA ACGGATCTGG
GCGGACAAGA CGGTCGAGAT CGCCGTGACC GGCGGGCTGC TGGGTCTGCT GACGCTGGTG
TTCTTCTTCC AGGGGATGGC GACGCGCAAC GCGCGGGCAT TCTTCTGGTT CCGGATGACG
TTCCTGAGCG TCGTGCTGGT CTATCTCGGC TGGTATGCCA ATGCACAGCT GTCGGTGGTC
AACCTGATGG CGCTCTTCGG CGCGCTGACC ACGGATTTCA GCTGGCAGGC CTTCCTGCTC
GATCCGCTGA CCTTCATCCT GTGGTTCGCT GTCGCCGCGG CCCTGCTGTT CTGGGGGCGC
GGGGCCTATT GCGGCTGGCT CTGCCCGTTC GGCGCCTTGC AGGAGCTGAC CAACAAGATC
GCGCGCGCCT GCCGCATTCC CCAGTGGGAG TTGCCATGGG GCCTGCACGA GCGTCTCTGG
CCGGTCAAAT ACATGATCTT CCTGGGCCTG TTCGGCGTCA GCCTCGCCAG CCTGGAGCAG
GCCGAGCATC TGGCCGAGGT CGAGCCCTTC AAGACCGCCA TCATCCTGAA CTTCCAGCGG
GCCTGGCCCT TCGTGGCCTA TGCGCTGGCC TTGCTGGCAG CCGGTCTCTT CGTCGAGCGG
TTCTTCTGCC GCTACCTGTG CCCGCTGGGC GCGGCCCTGG CGATCCCGGC CCGGCTGCGC
ATGTTCGACT GGCTCAAGCG GTACCGCGAA TGCGGCAATC CCTGCCAGAG CTGCGCCAAC
CAATGCCCCG TTCAGGCGAT CCACCCCACG GGCGAGATCA ACCCGAACGA ATGCGTGAAC
TGCCTGCATT GTCAGGTGCT CTATCAATCC GAAACGACCT GCCCGGTCGT CATCAAGAAA
CTCAAGCGCC GGCAAACGGT GGGCTCCGTG ACCCCGCGCG ACCTGACCGG GCATCCAAAC
GTCAAGACAC CTCAACCAGC TGAATGA
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| Protein sequence | MTPLRWIAHF LLLLTLAMPA WADPVLPRYL AKTPAADLVP GAEGYGPIRE DVPVAPILKD
GEVAAWAFIT SDFVSTTGYS GKPIDVLVAV APDATVSAVR LVKHSEPIVL IGIPESEMRT
LIEAYAGLDL VAEAESGGTA HELDIISGAT VTVMVIDDSI VRSGLRVARA LGLGGLAPPP
PDTGPAFELD LDAPAAPDWM TLEGDGTLRR LSLDVGQINA AFATMGDPRA AERALTLPPE
TTFIEMQTAL VSHPAIAASL LGEATARNVA DWLEPGDHAI AVFGRGLYSF KGSGYVRGGI
FDRIVLIQDE ISVRFRDRMH KRIVSVEAEG APVFVEADLF KIPADSGFDP AEPFRIQLLV
QREVGPIEKV FTTFDLGYQL PAGYLRAVTP PAAPAPSNAV NDLLAQDEAA AQQALWKRIW
ADKTVEIAVT GGLLGLLTLV FFFQGMATRN ARAFFWFRMT FLSVVLVYLG WYANAQLSVV
NLMALFGALT TDFSWQAFLL DPLTFILWFA VAAALLFWGR GAYCGWLCPF GALQELTNKI
ARACRIPQWE LPWGLHERLW PVKYMIFLGL FGVSLASLEQ AEHLAEVEPF KTAIILNFQR
AWPFVAYALA LLAAGLFVER FFCRYLCPLG AALAIPARLR MFDWLKRYRE CGNPCQSCAN
QCPVQAIHPT GEINPNECVN CLHCQVLYQS ETTCPVVIKK LKRRQTVGSV TPRDLTGHPN
VKTPQPAE
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