Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_3190 |
Symbol | hemA3 |
ID | 5712246 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | - |
Start bp | 3353217 |
End bp | 3354440 |
Gene Length | 1224 bp |
Protein Length | 407 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641269117 |
Product | 5-aminolevulinate synthase |
Protein accession | YP_001534524 |
Protein GI | 159045730 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0156] 7-keto-8-aminopelargonate synthetase and related enzymes |
TIGRFAM ID | [TIGR00858] 8-amino-7-oxononanoate synthase [TIGR01821] 5-aminolevulinic acid synthase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAGATCG ACCGCTATAT CGCCGACCGG CTCGCCCAAC TTCGCGAAGA AGGCAATTAT CGGGTCTTTG CCGATCTCGA GCGTCACCGG GGGGCGTTTC CCCGCGCCAC GCGCCGCAGC GGTTCGGGCA GTGGTCCTGT CACCATCTGG TGTTCGAACG ACTATCTCGG CATGGGCCAG CACCCCGATG TCCTAGCCGC GATGCACGGC GCGCTTGATC GGTCCGGCGC AGGCGCGGGC GGGACGCGCA ATATCTCGGG CACGACCCAT GACCATGTCG CGCTCGAAGC CGAGTTGGCG GACCTCCACG GCAAGGAGGC GGCGCTTCTG TTCACCTCGG GCTACGTTTC GAACTGGGCC GCGCTGGGCA CCCTGGGCGC GATGTTGCCC GATTGTCTGA TTCTCTCCGA TGCGCTGAAC CATGCCTCGA TGATCGAGGG CATCCGCCAT TCCCGCGCCG ACCGGGTCAT CTGGACCCAT AACGACATGG CCGACCTGGA GGCCAAGCTG GCGGCCCAAC CTCTTGAGCG GCCCAAGATC ATCGCCTTCG AAAGCGTCTA TTCCATGGAT GGGGACATCG CCCCGATCGC CGAGATCTGC GACCTGGCCG ACCGCTACAA TGCCATGACC TATCTCGACG AGGTGCACGC GGTGGGTCTC TATGGTCCGC GGGGCGGTGG GGTGGCCGAG CGCGAAGGGC TGATGGAGCG CATCACGGTG ATCGAGGGTA CGCTGGGCAA GGCCTTTGGC GTGGTCGGCG GCTATATCGC GGCGAGCGCG GACCTGTGCG ATTTCGTGCG GTCCTTTGCG TCGGGTTTCA TCTTCACCAC CGCTCTGCCG CCCCATGTGG CGGCCGGGGC CTGCGCCTCT GTTCGGCATC TCAAGCAGAG CAGTATCGAG CGACGCATCC AGCAAGAGCG CGTGGCCGAG TTGCGTGCCC GGTTCGATGC GATCGGCCTG CCCCATGTGC CGAACCCCAG CCACATCATT CCGCTGATGG TGGGCGACCC GGTGAAGTGC AAGTTCATCT CGGACACGCT GCTGGACGAG TTCGGCATCT ATATCCAGCC GATCAATTAC CCGACCGTGC CCAAGGGGAC CGAGCGGTTG CGCATCACCC CGTCGCCGGT CCACGACCCG GCGGATCTCG ACCGTTTGTG CACTGCGCTC GAAACGCTCT GGACCCGGTG CCAGCTCGCC CGGATGCCCC GCGCGGCCCA GTAG
|
Protein sequence | MQIDRYIADR LAQLREEGNY RVFADLERHR GAFPRATRRS GSGSGPVTIW CSNDYLGMGQ HPDVLAAMHG ALDRSGAGAG GTRNISGTTH DHVALEAELA DLHGKEAALL FTSGYVSNWA ALGTLGAMLP DCLILSDALN HASMIEGIRH SRADRVIWTH NDMADLEAKL AAQPLERPKI IAFESVYSMD GDIAPIAEIC DLADRYNAMT YLDEVHAVGL YGPRGGGVAE REGLMERITV IEGTLGKAFG VVGGYIAASA DLCDFVRSFA SGFIFTTALP PHVAAGACAS VRHLKQSSIE RRIQQERVAE LRARFDAIGL PHVPNPSHII PLMVGDPVKC KFISDTLLDE FGIYIQPINY PTVPKGTERL RITPSPVHDP ADLDRLCTAL ETLWTRCQLA RMPRAAQ
|
| |