| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3167 |
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| Symbol | napF |
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| ID | 5712223 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 3331477 |
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| End bp | 3331989 |
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| Gene Length | 513 bp |
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| Protein Length | 170 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641269094 |
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| Product | ferredoxin-type protein napF |
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| Protein accession | YP_001534501 |
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| Protein GI | 159045707 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1143] Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) |
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| TIGRFAM ID | [TIGR00402] ferredoxin-type protein NapF |
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCAAC AGGTCAGTCG GCGCGGGTTT CTGCGCCGAG CCACCCTTTG CGACGACTCG
AACGCGATCC GCCCCCCCGG CGCGCACCCG GATCACTTCC TCGACCTGTG TCGGAATTGC
GACCTTTGCC AGAAGGCCTG CCCGGAAAAC GTGCTGGTTC TGGACGAGGG CGGGCGACCG
CAACTTTCGC CCGCGCAAGG CGCCTGCACC TTCTGCGGGA TCTGTGCCGA GGTCTGTCCG
ACGGACGCGC TCGATCTCGC CCGGGTGGAC GACTGGCCCT GGCGCGCCGA GGCATCCTCG
GCCTGCCTGT CGCAGCAGGG CGTGTCCTGC CGGGCCTGTC AGGACAGCTG CGATGCGCGC
GCGATCAGCT TCCGATTGAT GACAGGAGGT CGCGCGCTCG CTGAGATTGA TCTCGATCAA
TGTGTAGGCT GTGGCGAATG CGTAGCAAGC TGCCCAGTCG GAGCACTCCA GCTCACCAAA
ACTCAACAAA ACGGACGGGA GGACGTCGCA TGA
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| Protein sequence | MTQQVSRRGF LRRATLCDDS NAIRPPGAHP DHFLDLCRNC DLCQKACPEN VLVLDEGGRP
QLSPAQGACT FCGICAEVCP TDALDLARVD DWPWRAEASS ACLSQQGVSC RACQDSCDAR
AISFRLMTGG RALAEIDLDQ CVGCGECVAS CPVGALQLTK TQQNGREDVA
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