| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3153 |
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| Symbol | |
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| ID | 5712209 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 3318825 |
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| End bp | 3319859 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641269080 |
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| Product | TRAP transporter - DctP subunit |
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| Protein accession | YP_001534487 |
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| Protein GI | 159045693 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACGCA CGCTTAGCCT TCTGGCCCTC ACAACCGCGC TGGCCACGCC GGCCTTCGCC
GAAGAACTGT CCGTGGTCGG CAGCTGGTCC GGCCTGCCGC TGCACAAGCA ATACGAGGCG
CCGTTCTGGG GCGAGACCCT GCCCGCGGCC TCGGGGGGCG AGATCACCGT GGCGTTGACC
ACGCACAACC AGATGAACCT CGGGGTGGGT GATGTTTTCC GCCTGCTTGG GGACGGAGTG
TATGACGTGG CGATGACCGT GGCGGATTAT GCCGTGGCCG ATGCGCCCGA GCTCGAAGGG
CTGGATGTGC CGCTGCTGGC GCTGACGGCG GACGAGGCGC GCGCCATGGT CGACGCGGCC
CGCCCGATGG TCGACGACAT CTACGCCGCC CGGTTCAACA GCAAGGTTCT GGCCATCGCG
CCCTACCCGC CGCAGGTGGT GTTCTGCAAC GCCGAGGTGT CGGAGTTGGC GGACCTTGAG
GGGCTGAAGG TGCGTGCCTC CGGCCGGATG ACGGCGAAAT TCCTCGAAGC GCTGGGAGCC
GAGGGCGTGA ATGTCAGTTT CTCGGAAGTG CCCGGCGCGC TGCAGAAGGG CGTGGTGGAT
TGTGCCGTGA CCGGGGCTGG ATCGGGCTAT TCGGCGGGCT GGTGGGAAGT GTCCACACAC
CTGATGGCGA TCCCGCTGGG TGGCTGGGAC AGCGTGGTGA CGGCCATGAA CATGGACCGC
TGGAACAGCC TGAGCGCCGA GAAGCAGGAG CTGATCATGT CCCAGGTGCA GGCGGAGTTC
GAAGCCCCGG CCTGGGCCAG CGCGCAGGAT GCCCTGGTCA ATGACATCGC CTGCCTGACC
GGCAACGGGG AGTGCCCCTC CGGCGAGGCG CGGGACATGA CGCTGGTCGA AGTGTCGGAT
GCGGATTTCG AGAAGGCACG CGGCGTGCTG GTCGGTGAAG TTCTCCCCGA CTGGGCGGAG
CGTGCGGGCG GCGACTGGGC CGAGCGCTGG AATGCCAGTG TCGGCAGCGT CGTCGGTGTG
AGCATCGGCG GCTGA
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| Protein sequence | MTRTLSLLAL TTALATPAFA EELSVVGSWS GLPLHKQYEA PFWGETLPAA SGGEITVALT
THNQMNLGVG DVFRLLGDGV YDVAMTVADY AVADAPELEG LDVPLLALTA DEARAMVDAA
RPMVDDIYAA RFNSKVLAIA PYPPQVVFCN AEVSELADLE GLKVRASGRM TAKFLEALGA
EGVNVSFSEV PGALQKGVVD CAVTGAGSGY SAGWWEVSTH LMAIPLGGWD SVVTAMNMDR
WNSLSAEKQE LIMSQVQAEF EAPAWASAQD ALVNDIACLT GNGECPSGEA RDMTLVEVSD
ADFEKARGVL VGEVLPDWAE RAGGDWAERW NASVGSVVGV SIGG
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