Gene Dshi_3152 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_3152 
Symbol 
ID5712208 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp3317939 
End bp3318841 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content66% 
IMG OID641269079 
Producthypothetical protein 
Protein accessionYP_001534486 
Protein GI159045692 
COG category[S] Function unknown 
COG ID[COG4336] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.808227 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCTGGC CCGCGCACTG TCGTCATGTC ACGGGGGAGG TCGGCATTTA CCAAACGCTC 
AAGCACAAGC CCCTCGCCGA GGTCCGGGCC GCGATCCGTG CGGGGCAGTA CTGCTCCCAC
ACGGCGGGGC TGGGCAAGGG GTTCCTGCAA GCCAACCTGG CAATCATGCC GGAGGCCTAT
GCGCTGGACT TCATGCGGTA TTGCCAGCGC AACCCGAAAC CCTGCCCCCT GAGCGGTGTG
TCGGACACCG GCAATCCGAT GATGACCACC ATGGGCGGGC AGATCGACAT CCGCACGGAT
GTGCCGGCCT ACAACATCTA TCGCGACGGA CGGCTGGCAG GGTCTGTGAC GGATATTCGC
GACCTCTGGC AAGACGACTT CGTGGCCTTC GCGTTGGGAT GCTCGTTCAC CTTCGAGCAC
GCGCTGCAAC AGGCGGGCAT CGCGCTGTGG CATATCGACA ATGACAAGAC CGTGCCGATG
TACCGCTCGG GCATCGACAC GGTGCCCGCG GGCCCGTTCC GGGGCAAGAT GGTGGTGTCC
ATGCGCGCGA TCCCCGAGGA CCGGGTCGCC GAGGCGGTGG AGATCTCGCG CCGCTTTCCG
CTCGCCCATG GCGCACCGGT CCATTGGGGC GATCCCGCGG GGCTGGGCAT AACCGATCTG
GCCCGCCCAG ACTGGGGCGA TCCGGTGCCC GTGCCCGAGG GGCATGTGCC GGTCTTCTGG
GCCTGCGGCG TGACCCCGCA AGTGGCGCTG GAGGCCGCCT CCATGCCCAT CTGCATCACC
CACAAACCCG GTCACATGCT GATCAGCGAC ATCCCCGAGG ATGCCGAGAT TCCGATCCTG
CGACCGCAAG ACCAACATAC ATCTCAGACC CAACAAGGAG AGACCCATGA CACGCACGCT
TAG
 
Protein sequence
MPWPAHCRHV TGEVGIYQTL KHKPLAEVRA AIRAGQYCSH TAGLGKGFLQ ANLAIMPEAY 
ALDFMRYCQR NPKPCPLSGV SDTGNPMMTT MGGQIDIRTD VPAYNIYRDG RLAGSVTDIR
DLWQDDFVAF ALGCSFTFEH ALQQAGIALW HIDNDKTVPM YRSGIDTVPA GPFRGKMVVS
MRAIPEDRVA EAVEISRRFP LAHGAPVHWG DPAGLGITDL ARPDWGDPVP VPEGHVPVFW
ACGVTPQVAL EAASMPICIT HKPGHMLISD IPEDAEIPIL RPQDQHTSQT QQGETHDTHA