Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_3152 |
Symbol | |
ID | 5712208 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | + |
Start bp | 3317939 |
End bp | 3318841 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641269079 |
Product | hypothetical protein |
Protein accession | YP_001534486 |
Protein GI | 159045692 |
COG category | [S] Function unknown |
COG ID | [COG4336] Uncharacterized conserved protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.808227 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCCTGGC CCGCGCACTG TCGTCATGTC ACGGGGGAGG TCGGCATTTA CCAAACGCTC AAGCACAAGC CCCTCGCCGA GGTCCGGGCC GCGATCCGTG CGGGGCAGTA CTGCTCCCAC ACGGCGGGGC TGGGCAAGGG GTTCCTGCAA GCCAACCTGG CAATCATGCC GGAGGCCTAT GCGCTGGACT TCATGCGGTA TTGCCAGCGC AACCCGAAAC CCTGCCCCCT GAGCGGTGTG TCGGACACCG GCAATCCGAT GATGACCACC ATGGGCGGGC AGATCGACAT CCGCACGGAT GTGCCGGCCT ACAACATCTA TCGCGACGGA CGGCTGGCAG GGTCTGTGAC GGATATTCGC GACCTCTGGC AAGACGACTT CGTGGCCTTC GCGTTGGGAT GCTCGTTCAC CTTCGAGCAC GCGCTGCAAC AGGCGGGCAT CGCGCTGTGG CATATCGACA ATGACAAGAC CGTGCCGATG TACCGCTCGG GCATCGACAC GGTGCCCGCG GGCCCGTTCC GGGGCAAGAT GGTGGTGTCC ATGCGCGCGA TCCCCGAGGA CCGGGTCGCC GAGGCGGTGG AGATCTCGCG CCGCTTTCCG CTCGCCCATG GCGCACCGGT CCATTGGGGC GATCCCGCGG GGCTGGGCAT AACCGATCTG GCCCGCCCAG ACTGGGGCGA TCCGGTGCCC GTGCCCGAGG GGCATGTGCC GGTCTTCTGG GCCTGCGGCG TGACCCCGCA AGTGGCGCTG GAGGCCGCCT CCATGCCCAT CTGCATCACC CACAAACCCG GTCACATGCT GATCAGCGAC ATCCCCGAGG ATGCCGAGAT TCCGATCCTG CGACCGCAAG ACCAACATAC ATCTCAGACC CAACAAGGAG AGACCCATGA CACGCACGCT TAG
|
Protein sequence | MPWPAHCRHV TGEVGIYQTL KHKPLAEVRA AIRAGQYCSH TAGLGKGFLQ ANLAIMPEAY ALDFMRYCQR NPKPCPLSGV SDTGNPMMTT MGGQIDIRTD VPAYNIYRDG RLAGSVTDIR DLWQDDFVAF ALGCSFTFEH ALQQAGIALW HIDNDKTVPM YRSGIDTVPA GPFRGKMVVS MRAIPEDRVA EAVEISRRFP LAHGAPVHWG DPAGLGITDL ARPDWGDPVP VPEGHVPVFW ACGVTPQVAL EAASMPICIT HKPGHMLISD IPEDAEIPIL RPQDQHTSQT QQGETHDTHA
|
| |