| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3150 |
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| Symbol | dat |
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| ID | 5712206 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 3316090 |
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| End bp | 3316944 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641269077 |
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| Product | D-alanine aminotransferase |
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| Protein accession | YP_001534484 |
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| Protein GI | 159045690 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
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| TIGRFAM ID | [TIGR01121] D-amino acid aminotransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0153378 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCCGCA TCGTCTATGT CAACGGAGAC TACCTGCCCG AGGAAGACGC GAAGATCTCG
GTCTTCGACC GCGGGTTCCT GTTCGCGGAC GGGGTCTATG AAGTGACCAG CGTACTCGGC
GGCAAGTTGA TCGATTTCGA GGGGCACGCG AAGCGGCTGG AGCGGTCCCT GTCGGAGCTG
GACATGCCCG CGCCGGTCAC CATGGACGCG TTGCTGGAGA TCCACCGGGA GCTGGTCGCG
CGCAACGAGG TGCACGAGGG GCTTGTCTAC CTTCAGGTGA CGCGGGGCGC GGCGGATCGG
GATTTCGCCT ATCCTGCCGA ACCCAAACCA TCGCTGGTGC TCTTCACCCA GACCAAGACG
CTCGCCGATG CGCCGGTGGC GAAGACCGGG ATCAAGGTCA TCTCGATCGA GGATCAGCGC
TGGGGCCGCC GGGACATCAA GACCGTGCAG CTGCTCTATC CGTCCATGGG CAAGATGATG
GCCAAGGCCG CCGGGGTCGA TGACGCCTGG ATGGTGGAGG ACGGCGCCGT GACCGAGGGC
ACATCCAACA ACGCCTATAT CGTGACCAAG GCCGGCACCA TCGTGACCCG ACACCTGGGC
AACGAGATCC TGCACGGGAT CACCCGCGCC GCCGTGCTGC GGTTTGCCCG CGAGGCGCAG
ATGGCCGTGG AAGAGCGTTC CTTCACCATC GAGGAGGCCA AGGACGCGGC GGAGGCCTTC
ATCACTTCGG CTTCGACCTT CGTGATGCCT GTGGTGGAGC TGGACGGGGC GCAGATCGGG
GACGGCACGC CCGGCCCGGT CGCCACGCGG CTGCGGGAAA TCTATCTCGA AGAGAGCCTG
AAGAAGGCGG TCTGA
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| Protein sequence | MSRIVYVNGD YLPEEDAKIS VFDRGFLFAD GVYEVTSVLG GKLIDFEGHA KRLERSLSEL
DMPAPVTMDA LLEIHRELVA RNEVHEGLVY LQVTRGAADR DFAYPAEPKP SLVLFTQTKT
LADAPVAKTG IKVISIEDQR WGRRDIKTVQ LLYPSMGKMM AKAAGVDDAW MVEDGAVTEG
TSNNAYIVTK AGTIVTRHLG NEILHGITRA AVLRFAREAQ MAVEERSFTI EEAKDAAEAF
ITSASTFVMP VVELDGAQIG DGTPGPVATR LREIYLEESL KKAV
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