| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3141 |
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| Symbol | ugpC3 |
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| ID | 5712197 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 3307792 |
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| End bp | 3308850 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641269068 |
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| Product | sugar ABC transporter |
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| Protein accession | YP_001534475 |
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| Protein GI | 159045681 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.204703 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGAGG TGATCCTCAA GGACCTGACC AAGCGGTGGG GCGATTTCGT CGGGGTGGAC
AACCAGTCCC TGCATGTCCG CGACGAGGAA TTCCTGGTGC TGCTGGGCCC CTCGGGCTGC
GGCAAGACCA CGACCATGCG GATGATCGCC GGGCTGGAGG ATCCGACCGA TGGCGAGATC
TGGATCGGCG ACCGAATGGT CAACGACGAC CTGCCCAAGG ACCGCGACGT GGCCATGGTG
TTCCAGAATT ACGGTCTCTA TCCGCATATG ACGATCTTCG AGAACATCGC CTATCCCCTG
CGGGTGCGCG GCGTCGACAA GGCCGAGATT CCGCCGCGGG TCCAAAGGGC CGCCGAGCAG
GTGGAACTGA CCAAGTTCCT CCACCGCAAG CCCAAGGCGC TCTCCGGCGG GCAGCGGCAG
CGCGTGGCCC TGGCCCGCGC CATCGTGCGC AAGCCCAAGG TCTTCCTGAT GGACGAGCCG
CTGTCGAACC TCGACGCCAA GCTGCGCGTC ACCATGCGGG CGGAGCTGAA ACATCTCAGC
CGCGAGTTGC AGATCACCAC CGTCTACGTG ACCCACGACC AGATCGAGGC GATGACGCTG
GCCGACCGGG TCGCGGTGAT GAAGCACGGC GTGATTCAGC AACTCGGCAC CCCGGACGAG
ATCTACAACG ACCCCGCGAA CCTCTTCGTG GCGGGCTTCA TCGGCTCGCC CGCCATGAAC
CTGATCAACG GCTCGGTCGA GGACGGCATG TTCGTGACCA CCGGTGGCAC CCGGCTGGTC
AAGGTGCCCT CCCCGGACCG GGCGCGCGCG ATCCTCGGGG TGCGCGCCGA CGACATGCAG
GTCCACGAAG CCGGGCAGGG CGATATCGAC GTGACCATCT ATGCCTTCGA GAATACCGGC
GAGAGCACCC TTCTGACCGT GCAATGGGGC AAGCAGCGGG TGATCGCCCG CGGTGACCGG
CACCTGCGCA AGGAACAGGA CGATGTCGTC GGCATCAGCC TGAACACCGA CCATTTGTAC
CTCTTCGATC CGGACACCGA AGAGCGCATC AGGATGTAG
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| Protein sequence | MAEVILKDLT KRWGDFVGVD NQSLHVRDEE FLVLLGPSGC GKTTTMRMIA GLEDPTDGEI
WIGDRMVNDD LPKDRDVAMV FQNYGLYPHM TIFENIAYPL RVRGVDKAEI PPRVQRAAEQ
VELTKFLHRK PKALSGGQRQ RVALARAIVR KPKVFLMDEP LSNLDAKLRV TMRAELKHLS
RELQITTVYV THDQIEAMTL ADRVAVMKHG VIQQLGTPDE IYNDPANLFV AGFIGSPAMN
LINGSVEDGM FVTTGGTRLV KVPSPDRARA ILGVRADDMQ VHEAGQGDID VTIYAFENTG
ESTLLTVQWG KQRVIARGDR HLRKEQDDVV GISLNTDHLY LFDPDTEERI RM
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