| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3115 |
|---|
| Symbol | |
|---|
| ID | 5710967 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dinoroseobacter shibae DFL 12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009952 |
|---|
| Strand | + |
|---|
| Start bp | 3282104 |
|---|
| End bp | 3282577 |
|---|
| Gene Length | 474 bp |
|---|
| Protein Length | 157 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 641269042 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001534449 |
|---|
| Protein GI | 159045655 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.0723929 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 48 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGACA CGCTCGACAC CCAGAACCTG GTGGACCTGT TCGACGCGCT CGCCCCGATT
GCCGAGCCTG CTCCGATCTC GCTCGCGCCC CAGACTGCGG GCTGGTGGGT GCTCGGTGCC
GCGCTGCTTG CCCTGCTCGC GTTTGCGGTT CTGGCCTGGA TGCGTCACCG CCGCGCGACG
GCCTATCGGC GCGCGGCCCT CAAGGCGCTC GCGGATGCGG GCGAGGACCC GGTGCAGATC
GCCGCCGTCC TGCGCCGCAC GGCGCTGGCC GCCTTCCCCC GGGCCGAGGT GGCCGGCCTG
CACGGGCCGG ATTGGCTCGC CTTTCTCGAC CGCACCGCCC CCGGCACCGG GTTCGCGGCC
AGCCCCGAGG GCACGGCGCT GACCCAGGCC CCCTACCGGC AGGCGCCGCC CGCCAAAGGG
TTGGCAACCA AGGCCCGACA CTGGATCACC CGCCACGAGG GGGCGCAGCC ATGA
|
|---|
| Protein sequence | MNDTLDTQNL VDLFDALAPI AEPAPISLAP QTAGWWVLGA ALLALLAFAV LAWMRHRRAT
AYRRAALKAL ADAGEDPVQI AAVLRRTALA AFPRAEVAGL HGPDWLAFLD RTAPGTGFAA
SPEGTALTQA PYRQAPPAKG LATKARHWIT RHEGAQP
|
|---|
| |