Gene Dshi_3112 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_3112 
Symbol 
ID5710964 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp3279170 
End bp3280126 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content66% 
IMG OID641269039 
Productnonspecific acid phosphatase 
Protein accessionYP_001534446 
Protein GI159045652 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.880914 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGGCGC TCTGCAAAGC TGTCTTGGTT CTGGCACTGT CGGCGGTTCC CGCCCTCGCC 
GATCCCCTGC CGTCCTGGAA CGATACCGAC ACCAAATCCG CGATCATCGG CTTCGTGGAC
CGCGTGACCG ACCCGGCCTC GCCCGACTAC GTCCCCCCTG CCGACCGCAT CGCCACCTTC
GACAATGACG GCAACCTCTG GGCCGAACAG CCAATCTATT TCCAGCTGAT CTATGCGCTC
GACCGGGTGA AGGAGCGCGC CGAGGCCGAC CCGTCCATCC TGTCCACCGA TGCGCTCAAG
GCCGCCGCCG AGGGCGATCT CGAAACCCTC GCTGCGGGCG GGATCGAAGG GCTGCTCGAA
GTCCTCGCCG TCAGCCATGC CGGGATCTCG GTCGAGGATT TCCAGGCCGA CGTGAACGCC
TGGTTCGACA GCGCGCGCCA TCCCACCACC GGCATGCGCT ATGACGAGAT GATCTATCAG
CCGATGCTGG AGCTGCTCAG TTACCTGCGC GACGAGGGGT TCCAGACCTG GATCGTCTCC
GGCGGCGGCG TCCATTTCAT CCGCGCCTTC GCCGAGCGGG CCTACAACAT CCCTCCCGAG
CAGGTCATGG GCTCCGCAGG CCCCACCGAA TACGTCGATG GCCAGGTCAT GAAACTGCCG
GGTATCGACT TCGTCGACGA CAAGGAGGGC AAGCCCGTCG GCATCGACAG CCGCATCGGC
AAACGCCCGA TCTTCGCCAG CGGCAATTCC GACGGCGATT TCGCCATGCT GGAATACACC
ACCTCCGGCG ACGGGCCTGG GTTCGGCCTG CTGTTGCACC ACACGGATGC GGAGCGCGAG
TTCGCCTATG ACCGCGAAGG CCATGTCGGC GTGCTGAACC GCGGCCTCGA CGAAGGCCCC
GACCGGGGCT GGGTCATCGT CGACATGGCC CGTGACTGGT CCCGCGTCTG GCCGTAA
 
Protein sequence
MRALCKAVLV LALSAVPALA DPLPSWNDTD TKSAIIGFVD RVTDPASPDY VPPADRIATF 
DNDGNLWAEQ PIYFQLIYAL DRVKERAEAD PSILSTDALK AAAEGDLETL AAGGIEGLLE
VLAVSHAGIS VEDFQADVNA WFDSARHPTT GMRYDEMIYQ PMLELLSYLR DEGFQTWIVS
GGGVHFIRAF AERAYNIPPE QVMGSAGPTE YVDGQVMKLP GIDFVDDKEG KPVGIDSRIG
KRPIFASGNS DGDFAMLEYT TSGDGPGFGL LLHHTDAERE FAYDREGHVG VLNRGLDEGP
DRGWVIVDMA RDWSRVWP