| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3111 |
|---|
| Symbol | aslA |
|---|
| ID | 5710963 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dinoroseobacter shibae DFL 12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009952 |
|---|
| Strand | + |
|---|
| Start bp | 3277491 |
|---|
| End bp | 3279092 |
|---|
| Gene Length | 1602 bp |
|---|
| Protein Length | 533 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 641269038 |
|---|
| Product | arylsulfatase precursor |
|---|
| Protein accession | YP_001534445 |
|---|
| Protein GI | 159045651 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3119] Arylsulfatase A and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.513855 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 53 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTCAACT TAGGAAGGCT GCGGCGCTGC GCGCTGGGGG CGGTCTTGCT GGGCATTTCG
GCAAGTGTCG CCGCCGCCCA GGAGACGGAC AAGCCCAACA TCCTGGTTAT CTGGGGCGAC
GATGTGGGCC AGTCGAACAT CTCGGCCTAC ACGATGGGTC TGATGGGATA CGAAACGCCC
AATATCGACC GGATCGCCGA AGAAGGCATG ATCTTCACCG ACTATTATGG CGAGCAGTCC
TGCACCGCGG GCCGGTCCTC CTATATCATG GGCCAGTCAG TGTTCCGCAC GGGCCTCTCC
AAGGTCGGTC TGCCCGGTGC CGAAGAAGGC ATGCAGGTCG AAGACCCAAC CATCGCGGGC
CTGCTGAAGG CCCAAGGCTA CGCAACCGGC CAGTTCGGCA AGAACCACCT GGGCGACCGG
GATGAGCATC TGCCGACCAA CCACGGCTTC GACGAGTTCT TCGGCAACCT CTATCACCTG
AACGCCGAGG AAGAGCCCGA GAACGAGGAC TACCCGGGCG ATCTCGTGCT CGAAGACGGC
CGCACCTTCC GCGAGGCGTT CGGGCCCCGC GGCGTGATCA AGTCCTCCGC CGACGGTACG
ATCGAAGACA CCGGCCCCCT GACCAAGGAG CGGATGGAAA CCGTGGACGA CGAGACCGTC
GCCGCGGCGA TCGACTTCAT CAAGCGCCAG GAAGAGGCGG GCAACCCCTG GTTCGTCTGG
TGGTCGGGCA CCCGGATGCA CTTCCGCACC CATGTCAGCG ACGAGCGTCG CCAGATGGCC
AACGAAATCG TCGGCAAGTC GGTGGACGAA TACACCGCCG GCATGATCGA ACATGACATG
CATATCGGTC AGTTCCTCGA CCTGCTGGAC GAGCTCGGCA TCGCCGACGA GACCATCGTG
CATTACTCCA CCGACAATGG CCCGCACATG AACACATGGC CCGATGCCGC CATGACGCCG
TTCTGGGGTG AGAAGAACAC CCAGTGGGAA GGCGCATGGC GCGTGCCCTC CATGGTCCGC
TGGCCCGGCC TGATCGAACC CGGCTCCGTG TCGAACTCGA TCATGCACCA CATGGACTGG
CTGCCCACCT ACCTGGCCGC AGCCGGGCGT CCGAACATCA AGGAAGAACT TCTCGACGGT
ATAACCGTGG CCGAGGTCGG CGGCGGACGC GATTACCGCG TGCATCTGGA TGGCTATAAC
TTCCTGCCCT ATTTCGCGGG CGAAGTTGAC ACCGGCCCCC GGCAGGAGAT CTTCTACTTC
ACCGATGACG GGGATCTTGC GGCCCTGCGC TTCGGCGACT GGAAGATCAC CTTCCTGGAG
CAGAAGGAAT GGGCGACTCT GCGCGCCTGG ATGGAGCCTC TGACGCCGCT GCGGGTGCCG
CTCATCGCCA ACCTGCGCCG CGACCCCTAT GAGCGCGGGT ATCGCACGTC GAACACCTAT
TACGACTGGA TGCTCGACCG GGCCTACATG CTGGTGCCCG CGCAAGCCTA CGTCGCGGAC
TTCCTGGAAA CCTTCCAGGA GTATCCACCC CGGCAGGAAG CCGCCTCCTT CAGCCTCGAC
AAGGTGATGG AGAAGCTGAC CGCACCCAGC GGCGCGCGCT AA
|
|---|
| Protein sequence | MVNLGRLRRC ALGAVLLGIS ASVAAAQETD KPNILVIWGD DVGQSNISAY TMGLMGYETP
NIDRIAEEGM IFTDYYGEQS CTAGRSSYIM GQSVFRTGLS KVGLPGAEEG MQVEDPTIAG
LLKAQGYATG QFGKNHLGDR DEHLPTNHGF DEFFGNLYHL NAEEEPENED YPGDLVLEDG
RTFREAFGPR GVIKSSADGT IEDTGPLTKE RMETVDDETV AAAIDFIKRQ EEAGNPWFVW
WSGTRMHFRT HVSDERRQMA NEIVGKSVDE YTAGMIEHDM HIGQFLDLLD ELGIADETIV
HYSTDNGPHM NTWPDAAMTP FWGEKNTQWE GAWRVPSMVR WPGLIEPGSV SNSIMHHMDW
LPTYLAAAGR PNIKEELLDG ITVAEVGGGR DYRVHLDGYN FLPYFAGEVD TGPRQEIFYF
TDDGDLAALR FGDWKITFLE QKEWATLRAW MEPLTPLRVP LIANLRRDPY ERGYRTSNTY
YDWMLDRAYM LVPAQAYVAD FLETFQEYPP RQEAASFSLD KVMEKLTAPS GAR
|
|---|
| |