Gene Dshi_3108 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_3108 
Symbol 
ID5710960 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp3273755 
End bp3274522 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content71% 
IMG OID641269035 
Productputative protein-disulfide isomerase 
Protein accessionYP_001534442 
Protein GI159045648 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1651] Protein-disulfide isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.768083 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGACAC GACGACAATT CTTGACCGGG GCCGCGATCC TCGGCGGCGG CTACGCGGCT 
CTACGCTACG GGGTGCCGGC GCTCACCGAC CTGTTTCGCG GCCTGCCTGC GCTGGAGCCG
CTGGCAGCGC CCGAGGGCTT TCGCACGATG CCGCTCGGCC CGGTGACCCG GGGGCTCGAC
CCGATGATCG GGCTGGAGCC TGCCACAGTG ACAGAGCTTG CGCCCAACGT GCTGCGCGGG
CGCCTCTGCG ACGCGCTCTT CGGAATGGAC GCCGTGCCCG AGGGCGTCGT CCCCATCGCG
TCCTTTTCCG ACTATGCCTG CCCGTTCTGC CGGGTGCTAA CCCCGCGCCT TCAGGCGCTG
GAGGAGACCT CCGGCGGAAC CATCCGGATC AAATGGCACG AATTGCCCCT CCTCGGTCCG
GCCTCCGCCG ACGGGGCGCG CGCCGCCCTC GCCGCCGGAC TGCAGGGGCG CTATGCCGAC
GCTCATGCGC GCCTGATCCG GGCCGGTTTC CAGCCAAGCG AGGCCTATCT CCGCGTTCTT
GCCACAGATC TCGACCTCGA CGCGGACCGC CTGCTGCGCG ACATGGACAG CCCTCAGGTC
ACCGCTGCCC TCACTGACAG CCGGGCGCTG GCGCAGCTTT TTGGCCTGGT GGGCACCCCG
GCCCTCTTGG TCGGGCGCAC ACTGGTGCAG GGCGAAGTCA GCGCCCGCAC GCTCGACCGC
CTCATCGCCC TGGAGCGCAG GGACGGCCCG ATCCCCAGCT GCAGTTAA
 
Protein sequence
MATRRQFLTG AAILGGGYAA LRYGVPALTD LFRGLPALEP LAAPEGFRTM PLGPVTRGLD 
PMIGLEPATV TELAPNVLRG RLCDALFGMD AVPEGVVPIA SFSDYACPFC RVLTPRLQAL
EETSGGTIRI KWHELPLLGP ASADGARAAL AAGLQGRYAD AHARLIRAGF QPSEAYLRVL
ATDLDLDADR LLRDMDSPQV TAALTDSRAL AQLFGLVGTP ALLVGRTLVQ GEVSARTLDR
LIALERRDGP IPSCS