| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3100 |
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| Symbol | ubiA |
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| ID | 5710952 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 3267233 |
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| End bp | 3268201 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641269027 |
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| Product | 4-hydroxybenzoate polyprenyltransferase |
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| Protein accession | YP_001534434 |
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| Protein GI | 159045640 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0382] 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases |
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| TIGRFAM ID | [TIGR01474] 4-hydroxybenzoate polyprenyl transferase, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAACG AGGCGCAGAC ACCAGACGGC GGAACCGTCG CCGACGCGCC CGCGGATAAC
TGGGTCGACC GCTACGCGCC GCCCGCAACC CGCCCCTACC TGCGGCTCAG CCGCGCGGAC
CGGCCGATCG GCACCTGGCT TTTGCTGATC CCCTGCTGGT GGGGCGCTCT TCTGGGGGCG
GCGGCGGGTG ACGGGTTCGA CCGCGGCACT GCCTGGATCA TGGTCGGCTG CGGGATTGGC
GCCTTCCTGA TGCGCGGCGC GGGCTGCACC TGGAACGATA TCACCGACCG CGACTTCGAC
GCAAAGGTCG CACGCACGCG CTCCCGCCCG ATCCCGTCGG GTCAGGTCAG CGTGCGCGGC
GCGCTGGTCT GGATGGTGGT GCAGGCGCTG CTGGCCTTCG GCATCCTGCT GAGCTTCAAC
CTGCCCGCCA TCGGGCTGGG CATCGCCTCG CTGGCGCTGG TCTGCGTCTA TCCCTTCGCC
AAACGGTTCA CCTGGTGGCC GCAGATCTTC CTGGGGCTTG CGTTCAACTG GGGCGCGCTG
CTGGCCTGGA CGGCCGAGAC CGGTACTCTG CTCGATGCGC CCAGCGTGCT GCTCTATGTC
GCCGGGATCG CCTGGACCCT GTTCTACGAC ACGATCTACG CCCATCAGGA CACCGAGGAC
GATGCCCTGA TCGGCGTAAA ATCGACCGCG CGGCTTTTCG GCGATCGATC GCGGCGGTGG
TTGGGGCTGT TCCTGATCGC GGCAACCGTG CTGGCGGGCG GGGCCGTCAT TGCCGCGCTG
GCCCCACTGG ATGCGCCCCT GGCGCTCGCG CTCGGGCTCG GCGGGGTCTG GGCCTTCGGA
TGGCACATGG TGTGGCAGCT GCGGCAGCTC GACCCGAACG ACCCCGGCAA CTGCCTGCGG
CTGTTTCGGT CCAATCGGGA CGCCGGTCTG ATCCTTGCGC TGTTTCTCGC CCTGACCTTG
CTCGCTTGA
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| Protein sequence | MSNEAQTPDG GTVADAPADN WVDRYAPPAT RPYLRLSRAD RPIGTWLLLI PCWWGALLGA
AAGDGFDRGT AWIMVGCGIG AFLMRGAGCT WNDITDRDFD AKVARTRSRP IPSGQVSVRG
ALVWMVVQAL LAFGILLSFN LPAIGLGIAS LALVCVYPFA KRFTWWPQIF LGLAFNWGAL
LAWTAETGTL LDAPSVLLYV AGIAWTLFYD TIYAHQDTED DALIGVKSTA RLFGDRSRRW
LGLFLIAATV LAGGAVIAAL APLDAPLALA LGLGGVWAFG WHMVWQLRQL DPNDPGNCLR
LFRSNRDAGL ILALFLALTL LA
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