Gene Dshi_3096 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_3096 
Symbol 
ID5710948 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp3263993 
End bp3264499 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content66% 
IMG OID641269023 
Productprotein of unknown function DUF805 
Protein accessionYP_001534430 
Protein GI159045636 
COG category[S] Function unknown 
COG ID[COG3152] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.151044 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGATTCC TGCGCGCCAT CGCATCCGCA TTTGTCAATG TCGTGAACTT CGGAGGGCGC 
GCGACGCGGG CCGAGTTCTG GTATTTCCAG CTCTTCATCT ATGCCCTGAC GATCGGCGGG
GTCCTGTTCG TGATCTTCGC TCTTCAGCCC GAGCAGATCG CCCTCCTCGG CGCCGCAACG
GACGACAATC CGTGGTATTT CGGGGTTTCC GTATTTCTGT GGATCCAAAG CTGGTCGCTG
CTGGTGCGGC GCCTGCACGA CACGGATCGC TCCGGATTCT GGTCGCTGAT CGGGTTCGTG
CCGATTATCG GGCTGCTGGT GCTGCTGGTC TTCGCGGTCC AGCCCGGAGA CCGGGGCAAC
AACCGCTTCG GCCCGCCGCG GGGCGGCGCG CGCCCGGCCC GCAGCCGGTT CGCGCGTCCG
GACGTCACGC CGGGCAAGAC CGAGGAAGAC CGCAAGGCCG AGGTCCGCGC GCTCTACCAG
GCGCGGGTGA AGTGCCTGAC GAACTGA
 
Protein sequence
MGFLRAIASA FVNVVNFGGR ATRAEFWYFQ LFIYALTIGG VLFVIFALQP EQIALLGAAT 
DDNPWYFGVS VFLWIQSWSL LVRRLHDTDR SGFWSLIGFV PIIGLLVLLV FAVQPGDRGN
NRFGPPRGGA RPARSRFARP DVTPGKTEED RKAEVRALYQ ARVKCLTN