| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3094 |
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| Symbol | pyrC1 |
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| ID | 5710946 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 3262081 |
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| End bp | 3263379 |
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| Gene Length | 1299 bp |
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| Protein Length | 432 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641269021 |
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| Product | dihydroorotase |
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| Protein accession | YP_001534428 |
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| Protein GI | 159045634 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0044] Dihydroorotase and related cyclic amidohydrolases |
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| TIGRFAM ID | [TIGR00857] dihydroorotase, multifunctional complex type |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0245996 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCCTG CGAAACCCCT CGCCCTGATC CATGCGCGGA TCGTGGACCC GGGCACCGGA
GAGCTCCGCG AAGGCGGGCT CTTGCTGCGC AACGGGGTGA TCGCCGCGCA TCTCGGACCC
GCAGAACGGC TCCCGGCCGA CACCGAGGTA CTCGACTGCG GCGGCAAATG CCTGGCCCCC
GGCATCGTCG ATATCGGCGT GAAGGTGGGC GAGCCCGGAG AGCGCCACAA GGAGAGTTTC
CGCACCGCGG GGCGCGCGGC GGCGGCCGGC GGCGTGACAA CCATGGTCAC CCGCGCCGAC
ACCACCCCGG CCATCGACAG CCCCGAAACC CTCGAATTCG CCGCCCGCCG CGCAGCGGAG
GCCAGCCCCG TGCGCCTTGC GCCCATGGCC GCCCTGACCA AGGGCCGACA GGGCCGCGAG
ATGGTCGAGA TCGGTTTTTT GCAGGATGCG GGCGCCGTGG CCTTTTCCGA CGGCGACCAC
GTGGTCGCGG ACCCCAAGGT GTTCCAGCGC TGCCTGGCCT ATGCCACCAG CCTCGGCGCG
CTGGTCATGG CGCATCCGCA GGACCCGGGG CTGAGCGCCG GTGCCGCCGT GACCTCGGGC
AAGTTCGCCA CCCTGCGCGG CCTGCCCGCG GTGTCCCCCA TGGCCGAGCG CATGGGGCTG
GAGCGCGACC TCGCCCTGGT GGAGATGACG GGTGCGCGCT ATCACGCGGA CCAGATCACC
ACCGCCCGCG CCCTGCCCTC TTTGCGCCGC GCGCGCGAGA TCGGCCTGGA CGTGACGGCG
GGCATCTCGA TCCACCACCT GACCCTCAAC GAATTCGACG TGGGCGACTA CCGGACCTTC
TTCAAGGTCA AGCCGCCCCT GCGGGCCGAG ACCGACCGGG TCGCCATGGT CGCCGCCGTG
GCCGCCGGAG AGATCGACAT CATCTCGTCG ATGCACACGC CCCAGGACGA AGAGAGCAAG
CGCCTTCCCT TCGAGGAAGC CGCCTCGGGC GCGGTCGGGC TGGAGACCCT GCTGCCCGCG
GCCCTGCGGC TCGTGCATTC GGGGGAGTTG ACCCTGCCGC AGCTCTGGCG CGCGCTGTCG
CTGAACCCGG CAAACCGGCT CGGCCTGCCG CAAGGGCGGC TCGATCCGGG CAGCCCGGCG
GATCTGGTGC TGTTCGACCC GGATGCGCCC TTCGTTCTCG ACCGCACGAT GCTACACTCG
AAATCCAAGA ACACGCCCTT CGACGGTGCC CGGCTGCAGG GGCGCGTGCT GCGCACCTAT
GTCGACGGCA GGCCCGTCCA CGTGCGGGAC GGGCACTGA
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| Protein sequence | MAPAKPLALI HARIVDPGTG ELREGGLLLR NGVIAAHLGP AERLPADTEV LDCGGKCLAP
GIVDIGVKVG EPGERHKESF RTAGRAAAAG GVTTMVTRAD TTPAIDSPET LEFAARRAAE
ASPVRLAPMA ALTKGRQGRE MVEIGFLQDA GAVAFSDGDH VVADPKVFQR CLAYATSLGA
LVMAHPQDPG LSAGAAVTSG KFATLRGLPA VSPMAERMGL ERDLALVEMT GARYHADQIT
TARALPSLRR AREIGLDVTA GISIHHLTLN EFDVGDYRTF FKVKPPLRAE TDRVAMVAAV
AAGEIDIISS MHTPQDEESK RLPFEEAASG AVGLETLLPA ALRLVHSGEL TLPQLWRALS
LNPANRLGLP QGRLDPGSPA DLVLFDPDAP FVLDRTMLHS KSKNTPFDGA RLQGRVLRTY
VDGRPVHVRD GH
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