Gene Dshi_3093 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_3093 
Symbol 
ID5710945 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp3261503 
End bp3262081 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content69% 
IMG OID641269020 
Producthypothetical protein 
Protein accessionYP_001534427 
Protein GI159045633 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0435554 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGAGG TGCCCGCCCA CGAGACCGGC ATCGTCCGGG TCTTCGCCGT CAATGGCGAC 
AGCCGCGGCT CCGGGACGGC CCAGAGCTTC CTGACGCGGC TGGAACAGGA CCCGGAGGAC
ATCGCCGCCG AAGCCGTACG CCTGCGTGAG ATGCTGGGCG CAGACCAGAT CGACCCGACC
TATACCGAGA CCTTCGCTGT CAAGGACGTC GCTGATCTCG GCCTGAGCCG GTATATCGCC
ACCGCCATGG ACGTCCCGAT GGAGACGCTG GCCCCCGACC GCGCGCGCCT CGATGCGCTG
GAGGGCGAGG TACTGATCGT GCTCTCCCGG GCACTCGGCG ACACCGCACA AACCCTCACG
CCGGGGGCGG ACCTGACCTT TATCGGGGCC TACAAGATGG CGGAGGTGCC GCTGACCGGA
CCCGTGAAGG CACCCCCGCC GGACCCGATG CCTGCGCCGA CGCCCGTCGA CGAAATCGAC
GCGCCTGAGG AAATCTCCAC CGGGCGCCGG ACCCTGATCG TGGGCGCGGC CCTGCTGATC
GCCGCGCTGC TGGTCATGAT CGTCGGGGCG AGCAACTGA
 
Protein sequence
MIEVPAHETG IVRVFAVNGD SRGSGTAQSF LTRLEQDPED IAAEAVRLRE MLGADQIDPT 
YTETFAVKDV ADLGLSRYIA TAMDVPMETL APDRARLDAL EGEVLIVLSR ALGDTAQTLT
PGADLTFIGA YKMAEVPLTG PVKAPPPDPM PAPTPVDEID APEEISTGRR TLIVGAALLI
AALLVMIVGA SN