Gene Dshi_3088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_3088 
Symbol 
ID5710940 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp3258055 
End bp3258663 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content68% 
IMG OID641269015 
Producthypothetical protein 
Protein accessionYP_001534422 
Protein GI159045628 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.679873 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGTTCC GTATCGCGGG CGCCCTGGGG GCGTTGACCC TGTTGGCGGC CTGCGCGGCG 
GAGTCGGAAT GGGCAAGTGA CGCCGAGGTG AACCAATCGC GCTACGCGGA TGGCGGGACC
GCGTCGGTCA CCTTGTTGAC GGTTATCCGC AACAGCACCG GCGAGGGTGG CCATACGGCC
GTTCTGATCG ACGGCGCGGA GCGCGTGATC TGGGATCCGG CGGGCACCTG GTGGCACCCC
TGGTCGCCCG AGCGCAACGA TCTGCACTAC GGCATCACCC CGCAGCTGGA GACCCACTAT
ATCGACTACC ATGCCCGCGA GGCCTGGCGC GTGGTCGAGC AAAGGGTCGA GGTGCCCCAG
CAGACAGCCG ATGCGATGAT CGCCGCCTTC GCTGCCAACG GTGCCGCGGG CTGGGCCAAC
TGCGCCCGGG TCACATCCGA CATCCTGCGG GACTACCCGG GGTTCGAGAC CATCCGCTCC
ACCTGGTTCC CGGTGGATAT CATGGAAGAC TTCGCCGCCC TGCCCGGCGT GACGACCACC
ACCTATTTCG ACGACGACGA CCTCGACCGG ACCAACCCGC TGCGCGTGGT GCCGGGCGGC
GCGGGCTGA
 
Protein sequence
MRFRIAGALG ALTLLAACAA ESEWASDAEV NQSRYADGGT ASVTLLTVIR NSTGEGGHTA 
VLIDGAERVI WDPAGTWWHP WSPERNDLHY GITPQLETHY IDYHAREAWR VVEQRVEVPQ
QTADAMIAAF AANGAAGWAN CARVTSDILR DYPGFETIRS TWFPVDIMED FAALPGVTTT
TYFDDDDLDR TNPLRVVPGG AG