Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_3086 |
Symbol | |
ID | 5710938 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | + |
Start bp | 3256765 |
End bp | 3257814 |
Gene Length | 1050 bp |
Protein Length | 349 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641269013 |
Product | metallo-beta-lactamase family protein |
Protein accession | YP_001534420 |
Protein GI | 159045626 |
COG category | [R] General function prediction only |
COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.825394 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACATGC CCTTCGGCCC CCTGCGGACC CCGTTCGAGA CCGCGCCGGA CACGGGCACC GCGACCGAGA TCGCCCAAGG CGTGCTCTGG ATGCGCCTGC CCCTGCCCAT GGTGCTGAAC CATGTGAATG TCTACGCGCT GGATGACGGG GACAGCTGGA CGCTGGTGGA CACAGGGCTT TACAGCCGCA AGAGCCGCGC GCTCTGGGAC GACCTGCTGG CCGGGCCACT GGCGGGCAAG CCCGTGCGCC GGGTGATCGT CACCCACCAC CACCCGGACC ACATGGGCTG CGCCGGCTGG TTCCAGTCCG ACCACGGGGC CGAGCTGATC ACCACCCGCA CGGCCTGGCT CATGGCGCGG ATGCTGCAAC TGGATGCCCA GGACCGGCCC ACGCCCGAAA CCCTGACCTT CTGGCGCCGG GCCGGGATGG ACCCCGAGAT CCTTGCAAGG CGCGCGGCCG AGCGGCCGTT CAACTTCGCC GATACCGTGG CCCCCATGCC ACTCGGCTTT ACCCGCATCC GGGAGGGCGA CACCGTCACA GCCGGGAGCC GCCGCTGGCA CGTCCGGATC GGCCATGGCC ACGCGCCCGA ACACGCAACT CTGTGGAGCG CGGATTGCAA CCTCGTGCTG GGCGGCGACC AGCTGCTATC GACGATTTCC CCCAATATCG GGGTTTACGC CACCGAGCCC GAGGCGGACC CCCTGTCCGG CTGGCTCGAC AGTTGCACCC GTCTCGCGAC CCACGCCACC GAGGATCACC TGGTTCTGCC CGGTCACAAG CTGCCGTTCA CCGGTCTGCC CAAGCGGCTC GACCAGCTGA TCGACAACCA CCACCAGGCG CTGGCCCGGC TGCAAGCGTT TCTGGCCGAA GCGCCGCGTA CCGCGCCCGA CTGCTTCGGC CTGCTGTTCA AGCGGACGAT CACCGGCGAC ACCTACGGCC TCGCGCTGGT CGAAGCGGTG GCGCATCTCA ACCACTTGCA CGCCACCGGG CGGGCGCGCT GGACCGAGCG GCCGGATGGC GTGCGCCTGT GGCACGCTGT CGCGGACTGA
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Protein sequence | MNMPFGPLRT PFETAPDTGT ATEIAQGVLW MRLPLPMVLN HVNVYALDDG DSWTLVDTGL YSRKSRALWD DLLAGPLAGK PVRRVIVTHH HPDHMGCAGW FQSDHGAELI TTRTAWLMAR MLQLDAQDRP TPETLTFWRR AGMDPEILAR RAAERPFNFA DTVAPMPLGF TRIREGDTVT AGSRRWHVRI GHGHAPEHAT LWSADCNLVL GGDQLLSTIS PNIGVYATEP EADPLSGWLD SCTRLATHAT EDHLVLPGHK LPFTGLPKRL DQLIDNHHQA LARLQAFLAE APRTAPDCFG LLFKRTITGD TYGLALVEAV AHLNHLHATG RARWTERPDG VRLWHAVAD
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