Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_3079 |
Symbol | |
ID | 5710931 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | + |
Start bp | 3246974 |
End bp | 3247306 |
Gene Length | 333 bp |
Protein Length | 110 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641269006 |
Product | AzlD branched-chain amino acid transport |
Protein accession | YP_001534413 |
Protein GI | 159045619 |
COG category | [S] Function unknown |
COG ID | [COG4392] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.900349 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGACA TCTCGCCCGT CACGCTCTGG GGGCTGATCG TGCTGCTTGG GATCGGGACT TTCCTGATCC GCTATTCCTT CCTCGGTCTG ATCGGCGACC GGGAATTGCC GGAATGGCTG TTGCGGCACC TGCGCTACAC CTCGGTCGCG GTGTTCCCGG CCCTGATCGC GCCGCTGGTG GTCTGGCCCG CCGCCACGGG CGGGGAGGCC GAGCCCGCCC GCATTTCAGC CGCCGTCGTC ACCCTCGCGG TCGGGGTGCT GAGCCGGAAT GTCCTGCTCT CGATCATCTG CGGGATCGCG ACGCTTTACG GGATGCTGGC GCTCCTGGGC TAA
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Protein sequence | MIDISPVTLW GLIVLLGIGT FLIRYSFLGL IGDRELPEWL LRHLRYTSVA VFPALIAPLV VWPAATGGEA EPARISAAVV TLAVGVLSRN VLLSIICGIA TLYGMLALLG
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