Gene Dshi_3079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_3079 
Symbol 
ID5710931 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp3246974 
End bp3247306 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content67% 
IMG OID641269006 
ProductAzlD branched-chain amino acid transport 
Protein accessionYP_001534413 
Protein GI159045619 
COG category[S] Function unknown 
COG ID[COG4392] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.900349 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGACA TCTCGCCCGT CACGCTCTGG GGGCTGATCG TGCTGCTTGG GATCGGGACT 
TTCCTGATCC GCTATTCCTT CCTCGGTCTG ATCGGCGACC GGGAATTGCC GGAATGGCTG
TTGCGGCACC TGCGCTACAC CTCGGTCGCG GTGTTCCCGG CCCTGATCGC GCCGCTGGTG
GTCTGGCCCG CCGCCACGGG CGGGGAGGCC GAGCCCGCCC GCATTTCAGC CGCCGTCGTC
ACCCTCGCGG TCGGGGTGCT GAGCCGGAAT GTCCTGCTCT CGATCATCTG CGGGATCGCG
ACGCTTTACG GGATGCTGGC GCTCCTGGGC TAA
 
Protein sequence
MIDISPVTLW GLIVLLGIGT FLIRYSFLGL IGDRELPEWL LRHLRYTSVA VFPALIAPLV 
VWPAATGGEA EPARISAAVV TLAVGVLSRN VLLSIICGIA TLYGMLALLG