Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_3078 |
Symbol | |
ID | 5710930 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | + |
Start bp | 3246273 |
End bp | 3246977 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641269005 |
Product | AzlC family protein |
Protein accession | YP_001534412 |
Protein GI | 159045618 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1296] Predicted branched-chain amino acid permease (azaleucine resistance) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCAGCC TCTATCTCCA GGGCCTGCGC CAAGGCGCGC CCTTTCTGCT CGTGACCGTG CCCTTCGGCA TGCTCTTCGG TGTGGTCGCC ACCGAGGCGG GGCTGAACAT CGCCGAGGTG ATGGGATTCA GCCTTCTGGT GATCGCGGGG GCCGCGCAAT TCACGGCCGT GCAACTTCTG AGCGAGAACG CCCCGGTGAT CATCGTGCTG GCCTCGGCCC TGGCGGTGAA CCTGCGCATG GCGCTCTATT CCGCGTCGAT CGCGCCGCAT CTCGGCCCCC TGCCCGTCTG GCAGAAGGCG ATTTGCGCCT ATTTTCTGGT GGATCAGACC TATGCCGTCT CTGTCGCCCG GTTCGAGAAG GACCCCGCAT TGCCCCTGCG GGAGCGGTTC GCCTTCCATC TCGGCGCGGC CTCGCTGATC TGCCTGTGCT GGTACCCCGC GACCTGGACC GGGGCGGTCC TGGGGGCGCG GATACCGCCG GAAATGGCGC TGGATTTCGC CCTGCCGATC ACCTTCCTCG CGCTGGTGGC CCCGGCCCTG ACCAGCCTGG CCCATGTGGT CGCGGCCTTC ACCGCGACCG TTCTGGCGCT GGCCTTTGTC GGCCTGCCCT TCAGCCTGGG CACCATCTTT GCGGCGGGCT GCGCGATGCT CGTCGGCGCC CGGGTGGAGC TGTGGCAGAC CCGCCGCCGG GAGGCTGCCC GATGA
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Protein sequence | MSSLYLQGLR QGAPFLLVTV PFGMLFGVVA TEAGLNIAEV MGFSLLVIAG AAQFTAVQLL SENAPVIIVL ASALAVNLRM ALYSASIAPH LGPLPVWQKA ICAYFLVDQT YAVSVARFEK DPALPLRERF AFHLGAASLI CLCWYPATWT GAVLGARIPP EMALDFALPI TFLALVAPAL TSLAHVVAAF TATVLALAFV GLPFSLGTIF AAGCAMLVGA RVELWQTRRR EAAR
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