| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3073 |
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| Symbol | ispE |
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| ID | 5710925 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 3240124 |
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| End bp | 3240987 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641269000 |
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| Product | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase |
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| Protein accession | YP_001534407 |
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| Protein GI | 159045613 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1947] 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase |
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| TIGRFAM ID | [TIGR00154] 4-diphosphocytidyl-2C-methyl-D-erythritol kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCCAC CGACTGAGGG GCGCGCCCCG GGGTCGCGAC CGATCGCGGG CTTTGCCCCG
GCGAAGATCA ACCTGACCCT GCATGTCACC GGGCAGCGGG GCGATGGCTA TCACCTGCTC
GACAGCCTCG TGGTCTTCGC CGATATCGGC GACCGGCTGG TGCTCGACCC CGACGCGGCC
CTCGGGCTGA CCGTGTCGGG CCCGCGCGCG GCGGGCGTGC CCACGGGGCC CGAAAACCTG
ATCCTGAAGG CCGCGGCCCA TCTCGGGGCG GTGCGCGGTG CGATCCATCT GGAAAAACAC
CTGCCCGCGG CGGCGGGGAT CGGTGGCGGG TCCTCCGATG CCGCGACCGC GCTCCGGCTC
CATGCGCAGG CGATGGGCCG CGCGCTGCCC GACGATGGCG CGGCCCTTGG TGCCGACGTG
CCCGTCTGCC TGCGAGGGAA GGCGACCCGC ATGTCCGGGA TCGGCGAAGC GCTCACCCCC
GTGGCGGGTC TGCCGCCGCT GCCCGCGGTG CTGGTCAACC CTGGCGTGGA CGTGCCGACC
CCGGCCGTGT TCAGGGGCCT GCGTCAAAAG GAAAATCCGC CCATGCCCGC CGACCTGCCC
GGCTTTGCAA CGCCGACCGA TTGCGCCCGA TGGCTCGCCA CCCAGCGCAA CGACCTGGAG
CCGCCCGCCC GCGCCGCGGC CCCCGTGATC GACAGCGTTC TGGCGGAGAT CGCGGGCGAT
CCGGACTGCC TGCTGGCCCG GATGTCCGGC TCCGGCGCGA CCTGTTTCGG TCTCTTCGAA
ACCCCTGCAC AGGCGCAGGC GGCGGCGGAA ACCCTCTCAA CCCGGCACCC GGACTGGTGG
GTCGCGCCGA CCGTGCTCAG GTGA
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| Protein sequence | MSPPTEGRAP GSRPIAGFAP AKINLTLHVT GQRGDGYHLL DSLVVFADIG DRLVLDPDAA
LGLTVSGPRA AGVPTGPENL ILKAAAHLGA VRGAIHLEKH LPAAAGIGGG SSDAATALRL
HAQAMGRALP DDGAALGADV PVCLRGKATR MSGIGEALTP VAGLPPLPAV LVNPGVDVPT
PAVFRGLRQK ENPPMPADLP GFATPTDCAR WLATQRNDLE PPARAAAPVI DSVLAEIAGD
PDCLLARMSG SGATCFGLFE TPAQAQAAAE TLSTRHPDWW VAPTVLR
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