Gene Dshi_3067 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_3067 
SymbolfabG1 
ID5710919 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp3235779 
End bp3236501 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content65% 
IMG OID641268994 
Productacetoacetyl-CoA reductase 
Protein accessionYP_001534401 
Protein GI159045607 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID[TIGR01829] acetoacetyl-CoA reductase 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGACGTG TTGCACTAGT GACCGGTGGC TCGCGTGGCA TCGGCGAAGC GATTTCCAAG 
AAACTGAAGG CGGACGGGTA TACCGTGGCC GCCACCTATG CGGGCAATGA CGAGAAGGCC
GCGGCCTTCA CCGAAGCCAC GGGGATCAAG ACCTACAAGT GGAACGTGGC CGACTACGAG
TCGAGCAAGG CCGGCATCGC CCAGGTCGAA GCCGATCTCG GCCCGATCGA GGTGGTCGTC
GCCAATGCGG GGATCACCCG CGACGCGCCG TTCCACAAGA TGACGCCCGA GCAGTGGCAC
GAGGTCATCG ACACCAACCT GACCGGCGTG TTCAACACGA TCCACCCGGT CTGGCCCGGC
ATGCGCGAGC GCAAGTTCGG CCGCATCATC GTGATCTCGT CGATCAACGG CCAGAAGGGC
CAGTTCGCCC AGGTGAACTA TGCCGCGACC AAGGCGGGCG ATCTGGGCAT CGTGAAGTCC
CTCGCCCAGG AAGGCGCGCG CGCCGGGATC ACCGCCAACG CGGTCTGCCC GGGCTATATC
GCCACGGAAA TGGTCATGGC GATCCCCGAG AAGGTGCGCG AGTCGATCAT TGCGGGCATC
CCGGTGGGCC GTCTGGGCGA GCCCGAGGAG ATTGCGCGCT GCGTGGCGTT CCTGGCCTCC
GATGACGCGG GCTTCATCTC GGGCTCGACG ATCTCGGCAA ACGGGGCGCA GTTCTTCGTC
TGA
 
Protein sequence
MGRVALVTGG SRGIGEAISK KLKADGYTVA ATYAGNDEKA AAFTEATGIK TYKWNVADYE 
SSKAGIAQVE ADLGPIEVVV ANAGITRDAP FHKMTPEQWH EVIDTNLTGV FNTIHPVWPG
MRERKFGRII VISSINGQKG QFAQVNYAAT KAGDLGIVKS LAQEGARAGI TANAVCPGYI
ATEMVMAIPE KVRESIIAGI PVGRLGEPEE IARCVAFLAS DDAGFISGST ISANGAQFFV