| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3065 |
|---|
| Symbol | |
|---|
| ID | 5710917 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dinoroseobacter shibae DFL 12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009952 |
|---|
| Strand | + |
|---|
| Start bp | 3233338 |
|---|
| End bp | 3234183 |
|---|
| Gene Length | 846 bp |
|---|
| Protein Length | 281 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641268992 |
|---|
| Product | EAL domain protein |
|---|
| Protein accession | YP_001534399 |
|---|
| Protein GI | 159045605 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2200] FOG: EAL domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGCCGA AGCAACCGCC GAAACGCCCC GGACCCCGGA ATCGCAACCC CCAGAACACG
CCCCTTGCCG AAGCGGTGGC CCAGCGGGAC AAGTCCGTCA TCGCCCTGGT GAAACAGGCC
GTCAACCACA AGAACGCCCT TCTGGCTTTC CAGCCGATCA TGCAGGCCGG ACGGCAGAAC
AAGGTCGCCT ACCAGGAGGG GTTGATCCGC ATCCATGATG ACAGTGGGCG GCTCATTCCC
GCAAAGGACT TCATCACCGT GGTCGAGGAA ATGGAGCTTG GCCGACAGAT CGACTGCCTC
GCGCTGGAGC GGGGGTTGGA GGCGCTGCGC CTTGTGCCGA CCTTGCGGCT GGGGATCAAC
ATGTCCGCGC GCTCCATCGG GTATCCGGAA TGGACCGAGA CCCTGGAACG GGGCCTCGCC
AAGGACCCGA CCATCGCCGA GCGGCTGATC CTGGAGATCA CCGAGCAGTC CGCGATGACC
ATCCCCGAGA TCGTGACCGT GTTCATGCGC GATCTGCAGC GCAAGGGCAT CACCTTCGCG
CTGGATGATT TCGGGGCCGG GCACACGTCC TTTGCCTATC TGCGGGACTT CTTCTTCGAC
ATCCTCAAGA TCGACGGCAA GTTCATCCGC AACATCTCCC TGAGTGCGGA CAACCAGGTC
CTGACCCAGG CGCTGATCTC CGTGGCCGGA CATTTCGACA TGTTCACGGT CGCGGAGTCG
GTGGAGAACG CTGCCGACGC GGCCTTCCTG ACCGCGGCCG GGATCGACTG CATGCAGGGT
TATCTTTTCG CCGCCCCCAG CACCAATCCG CCCTGGCTGG ACCAGCCCCA GCGCCTGCGC
GCCTGA
|
|---|
| Protein sequence | MPPKQPPKRP GPRNRNPQNT PLAEAVAQRD KSVIALVKQA VNHKNALLAF QPIMQAGRQN
KVAYQEGLIR IHDDSGRLIP AKDFITVVEE MELGRQIDCL ALERGLEALR LVPTLRLGIN
MSARSIGYPE WTETLERGLA KDPTIAERLI LEITEQSAMT IPEIVTVFMR DLQRKGITFA
LDDFGAGHTS FAYLRDFFFD ILKIDGKFIR NISLSADNQV LTQALISVAG HFDMFTVAES
VENAADAAFL TAAGIDCMQG YLFAAPSTNP PWLDQPQRLR A
|
|---|
| |