Gene Dshi_3056 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_3056 
SymbolftsE 
ID5710908 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp3224072 
End bp3224743 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content70% 
IMG OID641268983 
ProductABC transporter related 
Protein accessionYP_001534390 
Protein GI159045596 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG2884] Predicted ATPase involved in cell division 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCACAC TGGACAACGT GGCGTTCCGC TACGGCGACC GCCCGCTCTT CGGCGGCGTG 
TCTCTCGATG TCCAACCGGG GGATTTCTAC TTCCTCACCG GTCCCTCCGG CGCGGGCAAG
ACCACCCTGG TGCGCCTGTG CTACCTCGAC CTCGCCCCCG AGGACGGCAC CGTCACCTGC
TTCGGCAAAC CCGGCACCAC CCTCGCCCGG GACGAGATCG CCGACATGCG CCAGCGGATC
GGCGTCGTCC ACCAGGACTG CCGCTTCCTC GACCACCTGA GCGTCGCCGA CAACATCGCC
CTGCCGGTCT CGGTGGCGGG CCGCGCGGTG TCGGAGGGCG ACCTGAGCGA GTTGCTCAAA
TGGGTGGGCC TGTCGGGCCG CGCCGACGCC CGGCCGCCGG AACTGTCGGG CGGCGAACGC
CAGCGCGCCG CGCTCGCCCG CGCGGTGATG ATGGACCCGG ACGTGATCCT CGCGGACGAG
CCCACGGGCA ATATCGACTG GGAGATGTCC CAGCGCCTGC TCACCCTGCT GGTGGAGCTC
AACCGCATGG GCAAGGCGAT CCTGCTGGCC ACCCACGACA TGGCCCTGAT CCGGCAGGCC
AAGACCATGA CCACCGCCCG CGTCCTGCGC CTTGCAGGCG GGACGCTGCA ACAGGCGGGG
ACCGACCTGT GA
 
Protein sequence
MITLDNVAFR YGDRPLFGGV SLDVQPGDFY FLTGPSGAGK TTLVRLCYLD LAPEDGTVTC 
FGKPGTTLAR DEIADMRQRI GVVHQDCRFL DHLSVADNIA LPVSVAGRAV SEGDLSELLK
WVGLSGRADA RPPELSGGER QRAALARAVM MDPDVILADE PTGNIDWEMS QRLLTLLVEL
NRMGKAILLA THDMALIRQA KTMTTARVLR LAGGTLQQAG TDL