| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3012 |
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| Symbol | |
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| ID | 5710864 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 3181609 |
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| End bp | 3182298 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641268939 |
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| Product | putative Zn-dependent hydrolase of the beta-lactamase fold family |
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| Protein accession | YP_001534346 |
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| Protein GI | 159045552 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2220] Predicted Zn-dependent hydrolases of the beta-lactamase fold |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.47572 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.288675 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAGATCA CATGGTTCGG CCATGCGGCG TTCAAGCTGA CGGATGCCGC CGGTGCGTCG
GTCATAACCG ACCCCTACAC GCCCGAAGGC GTAGGCTACG CGCCCATCAC TGAGACCGCG
GACCTGGTCG TGATCTCCTC CGACGACGAC GATGCCCATT GCCGTGCCGA CCTGATCTCG
AGCGCACCCG CGGTGTGCAA TGCGCTGAAC GTGGCGCTCG ATCACGGCGG GGTCCAGACC
GTTGCGGGCC GCGAAATCCG CGCCATCGCC GCCGCCGAGT GGGAGCATCA CCCCCGCGGC
GTCCCGGGAC AGAACGGCAT GTACCGCTTC GAAATGGATG GAATGCAGAT CGCCCATATG
GGCGACTTGG GAAACCCGCT CACCAATGAC CAGATCGCCT TTTTCGAGGG CACCGATGTG
CTGCTGGCGC TGGCGGGCGG GTATCTGACC ATCGAGTTGC CGGACCTGAT GAAGATGATC
CAGGTCGCCA AGCCGAAACT GGTCATCCCG ATGCATTTCC GCACGCTCAC CTACCGGCCG
CGCAATACCA TGTGGATCGA GAGCTTCCTG AGCCATTTCG ACGAGGCCCA GGTCGATTTC
GCCTTTGGCC CCCACGCCAC AATCACCCCC GACACCCTGC CTGACACGAC CCGCGTTCTG
GTGATGGACT ACCTGCGACC AGGCGGCTGA
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| Protein sequence | MQITWFGHAA FKLTDAAGAS VITDPYTPEG VGYAPITETA DLVVISSDDD DAHCRADLIS
SAPAVCNALN VALDHGGVQT VAGREIRAIA AAEWEHHPRG VPGQNGMYRF EMDGMQIAHM
GDLGNPLTND QIAFFEGTDV LLALAGGYLT IELPDLMKMI QVAKPKLVIP MHFRTLTYRP
RNTMWIESFL SHFDEAQVDF AFGPHATITP DTLPDTTRVL VMDYLRPGG
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