| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3010 |
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| Symbol | |
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| ID | 5710862 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 3178564 |
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| End bp | 3179583 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641268937 |
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| Product | ABC transporter related |
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| Protein accession | YP_001534344 |
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| Protein GI | 159045550 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.932121 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.429089 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCGGCA TCCCGCGATC CTATCTGATC AATCGCACGA TCACCTTCGT GCTGACGGTG
TTCATCGCGG CCACGCTGAT CTGGCTGATC CCGCGGTTCT CGCCCGTGGA TCCGGCCGAG
ATCATGCTGT CGCGCATGGC CGCCGGTGGC GGGGCCGTGG CCGACAGCGA GGCGATCCTC
GCCCAGTTGC GGGCCGACTT CGGGCTGAAC GACCCGCTCA TCGTCCAGTA CCTCAAATAC
ATGGGCAACC TGCTGACCTT CAACCTTGGC ATCTCCACCG CCTCCTTCCC GACGCCGGTC
TCGGTATTGA TTGCGCAGGC CCTGCCCTGG ACGCTCGGGC TGATGATCCT GTCGGTGGTC
ATTACCTTCG TGATCGGCAA TGCGCTGGGC GCTTTCATGG TCTGGGAGCG CACGCCGAAG
ATCTGGAAGG TCGTGATACC CACCTTCATG ATCTTCACCT CGATCCCGCC GATCCTGTCG
GGGCTGTTGT TGATGTATAT CTTCTCGATC ACCCTGCGCT GGCTGCCGCT CACGGGCAGC
TACGGGCTGA CGGTGGAGCC CGGCTGGGAC TGGGCGTTCA TCTCGTCGGT GATCGAGCAT
GGCACCCTTC CGGCGCTCTC GATCATCGTC GTGACTTTCG GGTTCTGGAC GCTCGGGATG
CGGGGGCTGA TGATCTCGGT GCAGGGGGAG GATTACGTCA ACCTCGCCAA GGCCAAGGGG
CTGAAGCCGC GCTACGTCCT CTACAAATAC ATGGTGCGCA ACGCGATCCT GCCGCAGATC
ACGGCATTTG CGCTGAAGAT CGGGCTGCTG GTCTCTGGGC AGATCCTGGT GGAGCGGATC
TTCGGCTATA ACGGCATGGG CAAGCTTCTG TACGACGCGA TCCTCGATCA GGATTTCGCG
GTGATCCAGG GCGTCAGTTA CATCATCATC CTGATGACCG CGCTCTCGGT GTTCCTCGTG
GACCTGATCT ACCCGCTGAT CGACCCGCGC ATCCGCCTGT CCGAGGAGGC CGCGACATGA
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| Protein sequence | MFGIPRSYLI NRTITFVLTV FIAATLIWLI PRFSPVDPAE IMLSRMAAGG GAVADSEAIL
AQLRADFGLN DPLIVQYLKY MGNLLTFNLG ISTASFPTPV SVLIAQALPW TLGLMILSVV
ITFVIGNALG AFMVWERTPK IWKVVIPTFM IFTSIPPILS GLLLMYIFSI TLRWLPLTGS
YGLTVEPGWD WAFISSVIEH GTLPALSIIV VTFGFWTLGM RGLMISVQGE DYVNLAKAKG
LKPRYVLYKY MVRNAILPQI TAFALKIGLL VSGQILVERI FGYNGMGKLL YDAILDQDFA
VIQGVSYIII LMTALSVFLV DLIYPLIDPR IRLSEEAAT
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