| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3007 |
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| Symbol | ybgG |
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| ID | 5710859 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 3172670 |
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| End bp | 3175837 |
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| Gene Length | 3168 bp |
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| Protein Length | 1055 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641268934 |
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| Product | alpha-mannosidase |
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| Protein accession | YP_001534341 |
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| Protein GI | 159045547 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0383] Alpha-mannosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.799127 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCACC AGATCTTCTG GACCGAGCAG AAAATCCTCA GCCGCCTGCC GCTGATCGCG
CCGCTGGTCC ACCGCCGTGC TGCCCCGATC CCGCCCTTCC GGTACCTGCC GCTGGACAGC
CCGCGGGCCG AGGCCCCGGT GGGCCGCGAT GTGGATACCG CCGACTGGGC CGAGATCCCG
TTCGACAGCT ATTGGGGCGA CTGGAGCCAG GATTTCGTCC TCCGCTCCGA GTTCGCGGTG
CCCGAAGGCT TCGGCATCCA CGGCCCCGTC GCCCTGCACC TGCCGCTCGG GGTCGCGGGC
GACATCTTCT GCCACCCCGA GGCGCTGGCC TATATCGACG GGACCGGCTT TGCCTCCGCC
GACCGTCAGC ACCACGAGAT CTACCTCGAC CCCGACCTCT GCGACGGCGC GCGCCACAGC
CTCGCGCTCC ATGGCTGGAC CGGGCTCAGC GGCTGGCCGC CCGACCGCAA CGCCAGGACC
AAGCTCTTCA TGAAGCCCTG CGCCGTGGTC GAGATCGACA CGCCCACACG CGAGCTGGTG
GCGCTCGTGA GCCGTGCGCT GGACGTGGCC AGCCACATGG AGGACGGCAA CACCGCCCGG
AGCCGGATCC TCCGCGCGCT CGATCTGTGC TTCAAGGCGC TCGACACCCG CGACCCCATC
CGCTCCGACG CCTTCTACGA CAGCGTCCCC ACGGCCCTGG CCACGCTGCG CGAAGCGCTG
GAAGGCTACA AGGGCCGGAT GGAGGTCGAC ATCCTCGCCA TCGGCCACGC CCATATCGAC
ATCGCCTACC TGTGGCAGGT CGACCAGACC CGGCGCAAAT GCGGGCGCAG CTTCTCCAAC
GTGCTCAAGC TGATGGAGGA ATTTCCCGAC TACCATTTCA GCGCCTCGCA ACCGGTCCTC
TACGAGATGA CCGAGGCCGA CTACCCGCAG GTCTTCGACG GCATCCGCGC CCGCGTTGCC
GAAGGCCGGT GGGAGCCGAT GGGCGGCATG TGGGTCGAGC CGGATTGCAA CCTCGCGGGC
GGCGAGAGCC TCGTGCGGCA GCTGATGTAC GGGCGGCGCT ATTTCATCGA CAAGTTCGGC
GAAACCGCCG AGACCCCCGT GCTCTGGCTG CCCGACACGT TCGGCTTCAC CGCCGCCCTG
CCGCAGCTGA TGCAACAGGC CGGGCTGAAG TGGTTCGTCG CCAACAAGCT GAACTGGAAC
CAGTACAACC AGATGCCCAA CCAGTTGTTC TGGTGGGAAG GCATCGACGG CTCGCGCGTG
CTCAGCCACT TCCTTACGAC CCCCTCCACG GTGCAATACC TGCCCCATCC CACCACCTAC
AAGGCCGAGA TGACCGCGCG CGAGGTCTTC GGCACCTGGG ACAATTTCCG CCAGAAACAC
CTGCACCAGG AATTGATCAC CTGTTTCGGC TACGGCGATG GCGGTGGCGG GCCGACCCGC
GAGTTGATCG AGGCGGCCCG CGCCTATGCC GAATTGCCCG GCACGCCCTC GGTGCGCATG
GGCACCGTGC GGGAGTTTTT CGAGCGCGTC GAGGAAAACG CCGCCCATGA CCTGCCCACC
TGGTCCGGCG AGTTCTACCT GGAACTGCAC CGCGGCACCT TGACCAGCCA GGCCCGGATC
AAGCGCGCCA ATCGCAAGGC GGAGGTGCTG CTGCACGACG CCGAGTTCCT CGCGAGCCTC
GCGGGGGTCA TCACCGACCA CCCCTATCCG GGCGACGCGC TCGAAGAGGC GTGGAAACTC
GTCCTTCTGA ACCAGTTCCA CGACATCTTG CCCGGCACCT CGATCACCCA GGTGTTCGAG
GATGCGACCC GCGACTACGC CAAAGTGACC GAGATCGGCA CCGCCGCGCG CGACACGGCC
CTCGCCGCCC TCACCACCCG GATGCCGCCC GAGGCGCAGG TGATGGCCGT GAACCCCACC
GGGTTTTCCG TGGACCGGAT CGGCTGGATC GCCGAACCGG TGGCGGGGCT GTGCGACCTG
CGCACCAACC GCCCCCTGCG CACCCAACCC GTGGCCGATG GCACCCTGAT CGACCTGCCC
GCCCTGCCGG GCTATGCCGC GCTCGGCCTC GGACCCTGCG CCGAGGCGCC CGAGCCCACG
TCGCTGCGCA TCACCGACTT CCCAGATGGC GCCGTTCTGG AAAACGACCT GATCCGGGTC
CATGTCGCGC CCAACGGGCA GCTCGTGTCG GTCTTCGACA AGACCGCCCT GCGCGAGGTG
CTCGCCGCAG ACGCCTTCGG CAACCAGCTC CTTGCCTTCG AGGACCGACC CATGGTCTGG
GATGCCTGGG ATATCGACAT CTTCTACGAA GACCGCTGCG AGGTGATCGA CGCGCCCGTG
CGGTTCGAGA TCACCGAACG CGGTCCCCTG CGCGCATCAC TGGAGGTCGA ACACCATTGG
CGCGGCTCCA CCATCACCCA GCGCATCAGC CTGCATCACA ACTCCAAACG GATCGAGTTC
AAGACCGACG TGGACTGGCA AACCTCCCAT ATCCTGCTCA AATGCGCCTT CCCGGTGGAG
GTCTTCTCCC CCCGTGCCAC CTACGACATC CAGTTCGGAA ATACCGAACG CACCACCCAC
CGCAACACCA GCTGGGACTG GGCCCGGTTC GAAAGCGTCG GGCACAAATG GGCGGACCTG
AGCGAAGGCA ACTATGGCGT CGCCCTGCTC AATGATTGCA AATACGGCTA CGACATCCAC
CACAACGTGA TGCGCCTGAG CCTGCTGAAA TCCGCCACCA TGCCCGACCC GGTGCAGGAC
CGCGGCCGCC ACGAGATGAC CTATGCGCTC CTGCCGCATG AAGGCAACTG GCGCTCCGAC
GTGACCGAGA GCGGTTATAT CCTCAACAAC CCGGTGCTTT GCCGACCCGT CGCGGCCGGG
CAGGGCGACG CAGCCCTGGT GCAGATGGTC GGCGTCTCGG GCTTTTCGAC CGTGATCGAC
ACGGTCAAAC GGGCCGAGGA CGGGCAGGGC TATATCGTGC GTCTTTTCGA GAACGAGCGC
ACGCGCGGCC CCGTCACGCT ACGTTTCGGG TTCGACCTGG GCGAGGTGCG CGCCGTCACC
ATCCTGGAGG ACGACATCGG CCCGGTGGCC ATGCGCGGCC GGGAGGTCAC GGTGGAACTG
ACGCCCTACA AGATCGTGTC GCTCCGTGTG ATCCCCGCCG GGGCCTGA
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| Protein sequence | MKHQIFWTEQ KILSRLPLIA PLVHRRAAPI PPFRYLPLDS PRAEAPVGRD VDTADWAEIP
FDSYWGDWSQ DFVLRSEFAV PEGFGIHGPV ALHLPLGVAG DIFCHPEALA YIDGTGFASA
DRQHHEIYLD PDLCDGARHS LALHGWTGLS GWPPDRNART KLFMKPCAVV EIDTPTRELV
ALVSRALDVA SHMEDGNTAR SRILRALDLC FKALDTRDPI RSDAFYDSVP TALATLREAL
EGYKGRMEVD ILAIGHAHID IAYLWQVDQT RRKCGRSFSN VLKLMEEFPD YHFSASQPVL
YEMTEADYPQ VFDGIRARVA EGRWEPMGGM WVEPDCNLAG GESLVRQLMY GRRYFIDKFG
ETAETPVLWL PDTFGFTAAL PQLMQQAGLK WFVANKLNWN QYNQMPNQLF WWEGIDGSRV
LSHFLTTPST VQYLPHPTTY KAEMTAREVF GTWDNFRQKH LHQELITCFG YGDGGGGPTR
ELIEAARAYA ELPGTPSVRM GTVREFFERV EENAAHDLPT WSGEFYLELH RGTLTSQARI
KRANRKAEVL LHDAEFLASL AGVITDHPYP GDALEEAWKL VLLNQFHDIL PGTSITQVFE
DATRDYAKVT EIGTAARDTA LAALTTRMPP EAQVMAVNPT GFSVDRIGWI AEPVAGLCDL
RTNRPLRTQP VADGTLIDLP ALPGYAALGL GPCAEAPEPT SLRITDFPDG AVLENDLIRV
HVAPNGQLVS VFDKTALREV LAADAFGNQL LAFEDRPMVW DAWDIDIFYE DRCEVIDAPV
RFEITERGPL RASLEVEHHW RGSTITQRIS LHHNSKRIEF KTDVDWQTSH ILLKCAFPVE
VFSPRATYDI QFGNTERTTH RNTSWDWARF ESVGHKWADL SEGNYGVALL NDCKYGYDIH
HNVMRLSLLK SATMPDPVQD RGRHEMTYAL LPHEGNWRSD VTESGYILNN PVLCRPVAAG
QGDAALVQMV GVSGFSTVID TVKRAEDGQG YIVRLFENER TRGPVTLRFG FDLGEVRAVT
ILEDDIGPVA MRGREVTVEL TPYKIVSLRV IPAGA
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