| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3003 |
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| Symbol | dctP4 |
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| ID | 5710855 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 3169667 |
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| End bp | 3170650 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641268930 |
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| Product | TRAP transporter - DctP subunit |
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| Protein accession | YP_001534337 |
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| Protein GI | 159045543 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.613521 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACATA CTTTGCTTGC GGCGGTCGCC GCATCGGCCC TCGGGGTCGC GACCATGGCC
GGCGCCACGG AACTGCGCCT GTCGCACCAG TGGTCCAACC AGGACATCCG CCACCAGGTC
GCCCAGATCG TGGCCGACGA GGTCGCCGCG GCGGACGTGG ATCTCGAGAT CAAGATCTTC
GGGTCCCAGT CGCTCTTCAA GGCGCGGGAG CAGTACAAGC CCCTGTCGCG CGGCCAACTC
GACATGACCG TCTTCCCGCT CAGCTACGCA GGCGGCCAGC AGCCGGCCTT CAACCTGACC
CTGATGCCGG GCCTGGTGAA GAATCACGAT CACGCGGCGC GCCTGAACGA AAGCGCGTTC
ATGGAGGCGA TCGAGGCCAA GATGGCCGAG GATGACGTCA TGGTTCTGGT CCACGGCTAC
CTCGCGGGCG GTTTCGCCGG CAAGGACAAG TGCATCACCA AGCCCGAAGA CGTCCAGGGC
CTGCAAACCC GCGCCGCCGG TCGCGCCTTC GAGCAGATGC TCGCCGGGGC AGGGGCGTCG
ATCGCCTCCA TGGGCTCGGG CGAGATCTAC AACGCCATGC AGACCGGCGT TCTGAACGCC
GCGAACACCT CGTCCTCGTC CTTCGTGTCC TTCCGGATCT ACGAGCAGGT CGCCTGCTAC
ACCCCGGCGG GCGACTACGC GCTGTGGTTC ATGTACCAGC CGCTCCTGAT GAACAAATCC
ACCTTCGAGG GCCTCACCGC GGAGCAGCAG GAGGCCCTGC TCGCCGCCGC AGAGAAGGCC
GAGGCGTTCT ACCTCGAAGA GGCCAAGAAG GAAGACGCCG CCTCCCGCGA GGTATTCGAG
AAGGCCGGCG TCGAGATCGC CGAGATGACC CAGGCCGATT TCGACGCCTG GCGCGCCCTC
GCACAGGAAA CCTCCTACGC GGCCTTCGTG GCCGACACCC CCGGCGGGCA AGAGCTTCTG
GACAAGGCCC TCGCGGTCGA GTGA
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| Protein sequence | MKHTLLAAVA ASALGVATMA GATELRLSHQ WSNQDIRHQV AQIVADEVAA ADVDLEIKIF
GSQSLFKARE QYKPLSRGQL DMTVFPLSYA GGQQPAFNLT LMPGLVKNHD HAARLNESAF
MEAIEAKMAE DDVMVLVHGY LAGGFAGKDK CITKPEDVQG LQTRAAGRAF EQMLAGAGAS
IASMGSGEIY NAMQTGVLNA ANTSSSSFVS FRIYEQVACY TPAGDYALWF MYQPLLMNKS
TFEGLTAEQQ EALLAAAEKA EAFYLEEAKK EDAASREVFE KAGVEIAEMT QADFDAWRAL
AQETSYAAFV ADTPGGQELL DKALAVE
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