| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3002 |
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| Symbol | dctQ4 |
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| ID | 5710854 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 3169048 |
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| End bp | 3169599 |
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| Gene Length | 552 bp |
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| Protein Length | 183 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641268929 |
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| Product | TRAP transporter - DctQ subunit |
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| Protein accession | YP_001534336 |
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| Protein GI | 159045542 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3090] TRAP-type C4-dicarboxylate transport system, small permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCAGGGC AAAGCTCTGC CGCCGAGGCC CGGACAGGCG ACAACCTGTT CCTGAAGGCC
GTGGCGGCGC TTTCCACACT CGCAGGTTGG TTGTCCGCAG CGATGATCGT CATCGCCGTC
GGAATCACCT GCCAGATGAT CTTCATCCGC TTCGTGCTGA ACGGCTCCAC CGTGTGGCAG
ACCGAGGCGG TGGTCTACCT GATGGTGGGC GCGACCCTGA TGGGCCTACC GTACGTGCAA
CGTCTGCGCG GTCATGTGAA TGTCGACTTG ATCCCGCTGA TGATGAGCCG TCGCCTGCGC
CGGGTCATGG CGATTTTCAC TCTTTGTGTC TCGATTGCCA TCATCGGGGT GATGCTGTTT
TACGGCTATG AATACTGGCA CTTCGCGTGG GAACGCGGCT GGCGTTCGGA CACGGTCTGG
GGCCCCAAGC TGTGGATCCC CTACCTCGCC ATCCCCCTCG GGTTCGGCCT GCTGATGCTG
CAACTGATTG CCGATCTCGT CGCGGTTCTG CTGCGCATCG ACACCCCCTT CGGTCTCGGG
GAGGACGCCT GA
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| Protein sequence | MAGQSSAAEA RTGDNLFLKA VAALSTLAGW LSAAMIVIAV GITCQMIFIR FVLNGSTVWQ
TEAVVYLMVG ATLMGLPYVQ RLRGHVNVDL IPLMMSRRLR RVMAIFTLCV SIAIIGVMLF
YGYEYWHFAW ERGWRSDTVW GPKLWIPYLA IPLGFGLLML QLIADLVAVL LRIDTPFGLG
EDA
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