| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3000 |
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| Symbol | mcd |
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| ID | 5710852 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 3166482 |
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| End bp | 3167735 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641268927 |
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| Product | malonyl-CoA decarboxylase |
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| Protein accession | YP_001534334 |
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| Protein GI | 159045540 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAGCGTGA TGGCCGACCT TCTCGGCACG CTCTTCGAGC GGCGCTACCG CGCGGGGGCC
CCGGATCCGC GCGCCCTGCC AGAGCTGTCC CGCGCGCTGG TAGAGGCGCG GGCCGAAGGG
CCGGGGGGCG AGTTGGCAAG GGCGCTTCTG GACCGCTATG CCGCCGCGGA GCGGGATGAA
CGTCTGGCCT GGTTCACCTT CCTGGCCGAG GAAATGGATC TCGACACCGC CGCCCTGACC
GACGCGCTGG CCACCTATGC CGAGGACAGT GACCCGGAGG CCTATCGCCG CCTCGCAGCC
CTCTCCGAAC CCCCGCGGCA GGAGCTTGCC CGCCGCCTCA ACCAAGTGCC CGGGGCCACG
GCGCAACTGG TGGCGATGCG CGCCGACCTG CTGAGCATGA TCCCCGACGC CCCGGGCCTG
CAACGCGTGG ACCTGGACTT CCGTCACCTG TTCAAGAGCT GGTTCAACCG CGGCTTTCTG
GTGCTGCGCC CGATAACCTG GGAAAGCCCG GCCCATATCC TGGAGAAGAT CATCGCCTAC
GAGGCGGTGC ATGAAATCCA CTCCTGGGAT GACCTGCGGC GGCGGCTGGA GCCTGCGGAC
CGCCGCTGCT TTGCCTTCTT TCACCCCTCC ATGCCCGACG AGCCGCTGAT CTTCGTCGAG
GTCGCCCTGA CCACCGCGGT GCCCGGCTCG ATCCAGGCGC TTCTGTCCGA GGACCGCGCG
CAGATCGACC CGGGCCAGGC CACCACCGCG ACCTTCTACT CGATCTCGAA CTGCCAGGAC
GGGCTGGCGG GCATCTCCTT CGGCAATTTC CTGATCAAGC AGGTGGTCCG CGACCTGCAA
CGCGACCTGC CCCAGATCAC CCGCTTCGTC ACCCTCTCGC CGATCCCGGG CCTGTGCGCC
TGGACAGCCG AGACCGGCCT CGACTGGCCC GACGATGGCG CCGCCCAGGC CGCGCTCGCC
GCCCATTACC TGCTGAAGGC CAAGGGCCGT GGCACAGCCC CACGCGACCC GGTGGCGCGC
TTCCACCTGG GCAACGGCGC GCTGGTCCAT GCGGTCCATT CGGGGGCCGA TACCTCCGAC
AATGGCCGAC GCCAATCGGG CGGTGTCATG GTGAACTACC TTTACGACCT CGACCGGATC
GCCGAAAACC ACGCCAGGTT CCACGATGAC GGCACCATCG CCGCCAGCCG CGATATGGTC
AGCCTCGCCA AGCGCGCGCC CATGCCGAGA CTCGAGCAGA CGGAGACGAC CTGA
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| Protein sequence | MSVMADLLGT LFERRYRAGA PDPRALPELS RALVEARAEG PGGELARALL DRYAAAERDE
RLAWFTFLAE EMDLDTAALT DALATYAEDS DPEAYRRLAA LSEPPRQELA RRLNQVPGAT
AQLVAMRADL LSMIPDAPGL QRVDLDFRHL FKSWFNRGFL VLRPITWESP AHILEKIIAY
EAVHEIHSWD DLRRRLEPAD RRCFAFFHPS MPDEPLIFVE VALTTAVPGS IQALLSEDRA
QIDPGQATTA TFYSISNCQD GLAGISFGNF LIKQVVRDLQ RDLPQITRFV TLSPIPGLCA
WTAETGLDWP DDGAAQAALA AHYLLKAKGR GTAPRDPVAR FHLGNGALVH AVHSGADTSD
NGRRQSGGVM VNYLYDLDRI AENHARFHDD GTIAASRDMV SLAKRAPMPR LEQTETT
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