Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_2993 |
Symbol | |
ID | 5710845 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | - |
Start bp | 3157143 |
End bp | 3157856 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641268920 |
Product | hypothetical protein |
Protein accession | YP_001534327 |
Protein GI | 159045533 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCCAAGT TTCCCGCCAT CGCGACCGCT ATCCTGACCC TCTCCTTCGT GCTCTCGCCC CTCGTGACCG AGCCGTTCAG CGGGTTTCGC GCCGAACAGT TGCCGATCCC GCAGGTGCGC CCCCCGGTGC AGCCCGCGGG CTATGCCTTC GCGATCTGGG GCGTGCTTTA TGTCTGGCTG GTGGTGTCGG CGGCCTTCGG GCTCTGGAAG CGGCCCATGG CCGAAGATTG GGACCATGTG CGCTGGCCGC TGATGGTCAG CCTCGCGGCG GGCACGCCCT GGCTCTGGCT TGCGACCCAT TCGGCGATCG GGGCGGCGGT GCTGATCTTC GCCATGCTGA TCCCGGCGGT CATCGCGCTT CTGCGCGCGC CGCTTCGCGA CCGGCTCTGG CTGCGCACGC CTATCGCGCT TTATGCCGGG TGGGTGAGTG CGGCGGCCTG CGTGTCGCTC GCCACGGTCG CGGCGGGCTA CGGGGTGGGG TTCGGGGCGC TGTTCTGGGC AGTGGTGGGC GTGTCGCTGG CCTTTTTCAT CGCACGCTGG ACCCAGAGCC GCCGGGCCGA CACGCCGGAA TACAGTGTCG CGGTGATCTG GGCCCTGACC GGCATCGTGG TGGCCAATGG CACGACCGAG CCGCTGGTCT CTGTGCTGGC CATGGTCGGG ATCATCGCGC TGGTGCTGTT GTGGTGGACC GACCGGCATC CGGCCAAGAC CTAG
|
Protein sequence | MSKFPAIATA ILTLSFVLSP LVTEPFSGFR AEQLPIPQVR PPVQPAGYAF AIWGVLYVWL VVSAAFGLWK RPMAEDWDHV RWPLMVSLAA GTPWLWLATH SAIGAAVLIF AMLIPAVIAL LRAPLRDRLW LRTPIALYAG WVSAAACVSL ATVAAGYGVG FGALFWAVVG VSLAFFIARW TQSRRADTPE YSVAVIWALT GIVVANGTTE PLVSVLAMVG IIALVLLWWT DRHPAKT
|
| |