Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_2992 |
Symbol | dehH |
ID | 5710844 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | + |
Start bp | 3156259 |
End bp | 3157146 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641268919 |
Product | Haloacetate dehalogenase H-1 |
Protein accession | YP_001534326 |
Protein GI | 159045532 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.779666 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTGACG GCTTCACCCG CTCCCGCTTC GCCACCAACG GGATCACGCT CTCGGTCCAC CAGGCGGGCC GCGGCACCCC GCTGATCCTG CTCCACGGCT ATCCGCAGAA CCATGCCTGC TGGTCCCGTA TCGCCCCCAC CCTGGCGGAG CATTTCCACG TGATCATCCC CGACCTGCGC GGCTACGGCG ACAGCGACGC GCCCCCCGAC AACGCAGATC ACAGCACCTA TGCCAAGCGC ACCATGGCGC GCGACATCAC CGGGCTGATG GATGCGCTCG ACCTGCCCCG CGCTCATATC CTCGGTCATG ACAGGGGCGG CCGCGTGGCC TACCGGCTGG CGCTCGATGC GCCCGACCGC GTCGACCGGC TGGGCATCAT CGAGATCGTG CCGACCGGCG CCTTCTGGGC CAATTGGGAC GCAACCCTCG CGATGAAGGC CTATCACTGG ACCTTCCTCG CCCAGCCCGC GCCCCTGCCC GAGCGGATGA TCGGCGCGGA CCCTGTGGCC TATATCGACT GGACCCTGGC CGCCTGGACC CGGGCGAAAT CGCTCGACGT GTTCCCGCCC GAGGCCCTCG ACAGCTACCG CGCCCAGGCC CGCGACCCGG CCCGCATCCA CGCGATGTGC GCCGACTACC GCGCCGGGGC CACCTTCGAC CGGGCGCTCG ATGACGCGGA CGCCGCGGCA GGGCGCAAGA TTAGCGCGCC GCTGATGTTC CTCTGGGCCA AGGGCGGCTT TCCCGCCCAG ACCGGCGATC CCGCAAACCA CTGGCGCGCC TGGGCCACGG ATGTACGAGA CGCGTCCTGC GTCTCGGGCC ATTTCGCCAT GGAGGAGGCG CCCGAGGACG TGCTCGCGAC CTTCCTGCCG TTCTTCAAGG GGTCCTAG
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Protein sequence | MIDGFTRSRF ATNGITLSVH QAGRGTPLIL LHGYPQNHAC WSRIAPTLAE HFHVIIPDLR GYGDSDAPPD NADHSTYAKR TMARDITGLM DALDLPRAHI LGHDRGGRVA YRLALDAPDR VDRLGIIEIV PTGAFWANWD ATLAMKAYHW TFLAQPAPLP ERMIGADPVA YIDWTLAAWT RAKSLDVFPP EALDSYRAQA RDPARIHAMC ADYRAGATFD RALDDADAAA GRKISAPLMF LWAKGGFPAQ TGDPANHWRA WATDVRDASC VSGHFAMEEA PEDVLATFLP FFKGS
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