Gene Dshi_2969 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_2969 
Symbol 
ID5710820 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp3136386 
End bp3136724 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content67% 
IMG OID641268895 
Producthypothetical protein 
Protein accessionYP_001534303 
Protein GI159045509 
COG category[S] Function unknown 
COG ID[COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit 
TIGRFAM ID[TIGR00778] alkylhydroperoxidase AhpD family core domain 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACTGGA CGGCGTATAT GGACGAGGTC CGTGGCGATC TGAGAACCCT GAACGCGGCG 
ATCCCCGAGA CCGCGCGGGG CTTCGGGGCG CTGACAAAGG CCTCCAAGGA GAGTGGGGAA
CTCGACCTCA AGACCCGCGA ATTCGTGGCG CTCGGAATTG CCGTGTCGCA ACGCTGCGCG
CCCTGCATCG GGTTTCATGT GGAAGGGCTG GCCAAGGCGG GCGGCACCCG GCAGGAGCTG
GCCGATGTGC TCGGCGTGGC AGTGCAGATG GGTGGTGGGC CGTCGCTGAT GTATGCCGCG
CAGGCGATGG CGGCCTGGGA CGCGCTGGCC GAGAAGTGA
 
Protein sequence
MDWTAYMDEV RGDLRTLNAA IPETARGFGA LTKASKESGE LDLKTREFVA LGIAVSQRCA 
PCIGFHVEGL AKAGGTRQEL ADVLGVAVQM GGGPSLMYAA QAMAAWDALA EK