Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_2969 |
Symbol | |
ID | 5710820 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | - |
Start bp | 3136386 |
End bp | 3136724 |
Gene Length | 339 bp |
Protein Length | 112 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641268895 |
Product | hypothetical protein |
Protein accession | YP_001534303 |
Protein GI | 159045509 |
COG category | [S] Function unknown |
COG ID | [COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit |
TIGRFAM ID | [TIGR00778] alkylhydroperoxidase AhpD family core domain |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACTGGA CGGCGTATAT GGACGAGGTC CGTGGCGATC TGAGAACCCT GAACGCGGCG ATCCCCGAGA CCGCGCGGGG CTTCGGGGCG CTGACAAAGG CCTCCAAGGA GAGTGGGGAA CTCGACCTCA AGACCCGCGA ATTCGTGGCG CTCGGAATTG CCGTGTCGCA ACGCTGCGCG CCCTGCATCG GGTTTCATGT GGAAGGGCTG GCCAAGGCGG GCGGCACCCG GCAGGAGCTG GCCGATGTGC TCGGCGTGGC AGTGCAGATG GGTGGTGGGC CGTCGCTGAT GTATGCCGCG CAGGCGATGG CGGCCTGGGA CGCGCTGGCC GAGAAGTGA
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Protein sequence | MDWTAYMDEV RGDLRTLNAA IPETARGFGA LTKASKESGE LDLKTREFVA LGIAVSQRCA PCIGFHVEGL AKAGGTRQEL ADVLGVAVQM GGGPSLMYAA QAMAAWDALA EK
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