| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2966 |
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| Symbol | panB |
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| ID | 5710817 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 3131957 |
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| End bp | 3132778 |
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| Gene Length | 822 bp |
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| Protein Length | 273 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641268892 |
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| Product | 3-methyl-2-oxobutanoate hydroxymethyltransferase |
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| Protein accession | YP_001534300 |
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| Protein GI | 159045506 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0413] Ketopantoate hydroxymethyltransferase |
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| TIGRFAM ID | [TIGR00222] 3-methyl-2-oxobutanoate hydroxymethyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.636382 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGCAC AGCCCCCAGC ACCGGCCCCT ATCCGCCGCC TGACCGTCCC CCAGATCGCC
GCGCGCAAGG GGGCGGAGCC GATCGTGGCG CTCACCGCCT CCCATGTGCA GTTCGCGCGT
ATCCTCGATG CCCATTGCGA TGTGCTGCTG GTGGGGGACA GCCTCGGCAT GGTCAGCCAC
GGGTTCGAGA CCACCCTGCC CGTGAGCCTG GAGTTGATGA TCGCCCACGG GGCGGCGGTG
GTGCGGGGCA CGGCCCGGGC GCTCGTGGTG GTGGACATGC CGTTCGGGTC CTACGAGGAG
AGCCCGCAGG TGGCCTTCCG GTCCGCGGCG CGGATCATGG CCGAGACCGG CTGTCAGGCG
GTCAAGCTGG AAGGGGGCGC GCGCATGGCC GAGACCATCG CCTTTCTGAC CGCGCGCGGT
ATTCCGGTGA TGGCCCATAT CGGGCTGACG CCCCAGTCGT CCAACACGAT GGGCGGGTTC
AAGACCCAGG GCCGCGAGGC GGACAGCTGG CCGCTGCACC ATGCCGATGC CGCCGCCGTG
GCCGAGGCGG GGGCGTTTTC CGTGGTTCTG GAGGGGATGG TGGAGCCGCT GGCGGCAGAG
GTGTCCGCGG CCTGCCCGAT CCCGACCATC GGCATCGGCG CCTCGGCGGC CTGCGACGGG
CAGATCCTGG TGATGGAGGA CATGCTGGGG CTGGGGGACT GGGCGCCGAA ATTCGTGCGC
AAGTTCGCCG ATCTGCGCGG CGAGGTGGAC CGGGCCGCGG GAGCCTATGC CGCCGAGGTG
CGCGCGCGCA GCTTCCCGGC CGAGGACGAG ACCTACCGCT GA
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| Protein sequence | MSAQPPAPAP IRRLTVPQIA ARKGAEPIVA LTASHVQFAR ILDAHCDVLL VGDSLGMVSH
GFETTLPVSL ELMIAHGAAV VRGTARALVV VDMPFGSYEE SPQVAFRSAA RIMAETGCQA
VKLEGGARMA ETIAFLTARG IPVMAHIGLT PQSSNTMGGF KTQGREADSW PLHHADAAAV
AEAGAFSVVL EGMVEPLAAE VSAACPIPTI GIGASAACDG QILVMEDMLG LGDWAPKFVR
KFADLRGEVD RAAGAYAAEV RARSFPAEDE TYR
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