| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2961 |
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| Symbol | |
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| ID | 5710812 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 3126461 |
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| End bp | 3127996 |
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| Gene Length | 1536 bp |
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| Protein Length | 511 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641268887 |
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| Product | ABC transporter ATP binding protein |
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| Protein accession | YP_001534295 |
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| Protein GI | 159045501 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3845] ABC-type uncharacterized transport systems, ATPase components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.143665 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGCCC TCTTGCGCGT CGCGGGGCTG ACCAAGGCCT ATCCCGGCGT GGTCGCCAAT
GACGACGTCT CGTTCGAAAT CGCCGAGGGC GAGGTCCATG CCCTGCTGGG CGAGAACGGC
GCGGGCAAAT CCACCCTGGT CAAGATGATC TATGGCCTCG TGCGCCCGGA TAGCGGAACC
ATGACCTTTG GCGGTGTGCC TTTCGCCCCG CCAGAACCGC GCGCCGCGCG CAGCGCCGGT
GTGGCGATGG TGTTCCAGCA TTTCAGCCTG TTCGAGGCGC TGACCGTGGC CGAGAACATC
GCCCTCGGGA TGGAGGACCC GCCGAAGATG CGTGACCTCG CCGCCCGGAT CACCCAGGTC
AGCCAGGCCT ACGGCCTGCC GCTGGACCCG TCGCGGCTGG TCGGCACGCT CAGCGCGGGC
GAGCGCCAGC GGGTGGAGAT CATCCGTTGC CTGTTGCAGG AGCCCAAGCT GCTGATCATG
GACGAGCCGA CCTCGGTGCT GACCCCGCAG GAGGTCGACA TCCTTTTCGC GACGCTGCGC
AAACTGCGCG ACGAGGGCAC CGCGATCCTC TATATCTCCC ACAAGCTCGA AGAGATCCGG
GCGCTTTGCG ACAGTGCCAC GATCCTGCGG CTGGGCAAGG TAGTCGCCAC CTGCGACCCG
CGGGAGAAAT CGGCGCGCGA GCTGGCCGAG ATGATGGTCG GCAAGACCCT GCAGCAGACG
AAATCGGCCG GCAACGCCTT TGGCGCGCCG GTGCTGGAAT TGCGCGGTCT GTCGCAACCG
GCCACGACGC CCTTCGGCAC CCCCCTGCGC GACATCTCGC TGGAGGTGCG CGCGGGCGAG
GTGCTGGGCA TCGGCGGGGT GGCCGGGAAC GGGCAGGACG AGCTGCTCTC GGCGATCTCG
GGGGAGCGGC GGGCCGAGGA TGCGATCTTC CTGCACGGCA CACCAATCTC GAAGATCGGC
CCGGCGGCGC GGCGCCAGCT TGGCGTGCTC AGCGGCCCCG AAGAGCGCCT CGGCCACGCC
GCCGCCCCGG ACATGAGCCT GACCGAAAAC GCCCTGCTGA CCGGGTCGGT GCGCGAGAAG
CTGACGCGCA ACGGCTTTCT CGACTGGGCC AAAACCCGGG CTTTTGCCGA GCGCATCATC
GAAACCTTCG ATGTGCGCAC CCCCGGCCCC GAGGCTGCAG CCCGGGCCCT GTCGGGCGGC
AACCTGCAGA AATTCGTGAT CGGGCGCGAG GTGCTGCAGC GGCCCGAGGT GCTGATCGTG
AACCAGCCGA CCTGGGGAGT GGACGCTTCC GCCGCCGCCG CGATCCGGCA GGCCCTCCTG
GATCTGGCCG CGGGCGGCAC CGCCGTGGTG GTGATCAGTC AGGACCTGGA CGAGCTGATG
GAGATCTCCG ACACTTTCGC CGCGCTGAAC GGCGGACGGC TGAGCGGCAA GGTCCCCGCC
GCGGGCCTGA CGGTGGAGCA GATCGGGCTG ATGCTGGGCG GTGCCCATGA CATGGACCTG
CCCGACCCGA ACGCGGAGGC GGTCCTCCAT GCCTGA
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| Protein sequence | MTALLRVAGL TKAYPGVVAN DDVSFEIAEG EVHALLGENG AGKSTLVKMI YGLVRPDSGT
MTFGGVPFAP PEPRAARSAG VAMVFQHFSL FEALTVAENI ALGMEDPPKM RDLAARITQV
SQAYGLPLDP SRLVGTLSAG ERQRVEIIRC LLQEPKLLIM DEPTSVLTPQ EVDILFATLR
KLRDEGTAIL YISHKLEEIR ALCDSATILR LGKVVATCDP REKSARELAE MMVGKTLQQT
KSAGNAFGAP VLELRGLSQP ATTPFGTPLR DISLEVRAGE VLGIGGVAGN GQDELLSAIS
GERRAEDAIF LHGTPISKIG PAARRQLGVL SGPEERLGHA AAPDMSLTEN ALLTGSVREK
LTRNGFLDWA KTRAFAERII ETFDVRTPGP EAAARALSGG NLQKFVIGRE VLQRPEVLIV
NQPTWGVDAS AAAAIRQALL DLAAGGTAVV VISQDLDELM EISDTFAALN GGRLSGKVPA
AGLTVEQIGL MLGGAHDMDL PDPNAEAVLH A
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