| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2955 |
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| Symbol | hisS |
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| ID | 5710806 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 3115954 |
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| End bp | 3117447 |
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| Gene Length | 1494 bp |
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| Protein Length | 497 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641268881 |
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| Product | histidyl-tRNA synthetase |
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| Protein accession | YP_001534289 |
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| Protein GI | 159045495 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0124] Histidyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00442] histidyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.48972 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.0224984 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAAGC CCAAGAAGAC CCCGCGCCCC AAGGCCCAGA CGCCCAAGGG CTTTCGCGAC
TATTTCGGCA CTGAGGTGAC CGAACGCAAG GCCATGCTCG ACAAGATCGC CGAGGTGTAT
CACCTGTACG GGTTCGACCC GCTGGAAACC TCCGCCGTCG AGACGGTCGA GGCGCTGGGC
AAGTTCCTGC CGGACGTGGA CCGGCCCAAC GAAGGCGTCT TTGCCTGGCA GGAAGACGAC
GCGGACTGGC TGGCGCTGCG CTACGACCTG ACCGCGCCGC TCGCCCGGGT CGCCGCCCAG
TACCGCAACG ACCTGCCCAG CCCCTATCGG CGCTACGCCA TGGGCCCGGT CTGGCGCAAC
GAGAAACCCG GCCCGGGGCG GTTCCGGCAG TTCTATCAAT GCGATGCGGA CACCGTGGGC
GCGCCCAGCG TGGCGGCGGA TGCCGAGGTC TGCGCGATGC TCGCCACAGC GCTCGAGGCC
GTGGGGATCG CCCGCGGCGA CTACATCGTG CGGGTAAATA ATCGAAAAGT ACTGAACGGC
GTATTCGAGA GCGCTGGTCT GCTGGATTCC GAATACCTCG CAGACAACCT AAAGCGCGTG
GGAATTGCGA TCCGCGCCGT CGATAAGTTT GATCGTTTGG GTTCGGACGG GGTGAAAGCT
CTTCTCGGTA AGGGGAGAGA GGATGAAAGC GGAGCGTTTG TAGAAGGTGC CAATCTAGCA
GAGTGGCAAA TTGACCGTAT TTTAGGGTTC GCGACGGCAA AGCAATCAAC CGAATTGGAG
ACGCTTGATC GTCTTACAGA ACTCGTTGGC AACTCAGATG AAGGTTTGCA GGGCGTTGAA
GAGCTCAAGC ACATCTCGGA TCTGCTTTCC GCCCAGGGCT TCGGCCCCGA TCGCATCGTC
ATCGACCCCT CCGTCGTGCG CGGGCTGGGC TACTACACCG GTCCGGTCTT CGAGGCGGAA
CTGACCTTCG AGGTCCAGAA CGACAAGGGC CAGACCGTGC AATTCGGCTC CGTCGCGGGT
GGCGGGCGCT ATGACGACCT GGTCAAGCGC TTCACCGGGC AGGCGGTGCC GGCGACGGGG
GTCTCCATCG GCGTCGACCG GCTGCTCGCG GCCCTGCGCG CCAAGGGGCA GGCGCAAACC
GCGGCCCCCG GCCCGGTGAT CGTCACCGTC ATGGACCGCG ACCGGATCGC CGACTACCAG
GCCATGGTCG GCACCCTGCG GGACGCGGGC ATCCGGGCCG AGCTCTACCT CGGGAACCCC
AAGAATTTCG GCAACCAGCT CAAATACGCT GACAAGCGCG CCGCTCCCGT GGCCGTGATC
CAGGGCAGTG ACGAGGCCGC CCGCGGCGTG GTCCAGATCA AGGACCTCGT ACTCGGTGCG
CAGATCGCAG AAAGCGCCAG CCTCGATGAA TGGAAATCGC AACCGGCCCA ACGGGAGGTT
CCCGTGGCCG ACCTTGTGGC CGAGGTGCAG GCCATTCTCG CGCGCGGGGC CTGA
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| Protein sequence | MAKPKKTPRP KAQTPKGFRD YFGTEVTERK AMLDKIAEVY HLYGFDPLET SAVETVEALG
KFLPDVDRPN EGVFAWQEDD ADWLALRYDL TAPLARVAAQ YRNDLPSPYR RYAMGPVWRN
EKPGPGRFRQ FYQCDADTVG APSVAADAEV CAMLATALEA VGIARGDYIV RVNNRKVLNG
VFESAGLLDS EYLADNLKRV GIAIRAVDKF DRLGSDGVKA LLGKGREDES GAFVEGANLA
EWQIDRILGF ATAKQSTELE TLDRLTELVG NSDEGLQGVE ELKHISDLLS AQGFGPDRIV
IDPSVVRGLG YYTGPVFEAE LTFEVQNDKG QTVQFGSVAG GGRYDDLVKR FTGQAVPATG
VSIGVDRLLA ALRAKGQAQT AAPGPVIVTV MDRDRIADYQ AMVGTLRDAG IRAELYLGNP
KNFGNQLKYA DKRAAPVAVI QGSDEAARGV VQIKDLVLGA QIAESASLDE WKSQPAQREV
PVADLVAEVQ AILARGA
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