Gene Dshi_2951 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_2951 
Symbol 
ID5710802 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp3112137 
End bp3113279 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content69% 
IMG OID641268877 
Producthypothetical protein 
Protein accessionYP_001534285 
Protein GI159045491 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0031] Cysteine synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0967598 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.0233852 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCAAGGCG CTTGGCAAGG CCGTTGCAAC GGCCTTGGTC GCCGCCGAGG GCGCGGATCA 
CATCGCGTGC AGCTGAGCGC CGCCGCCAGT ACCCGCGACT GGGTCGCCGA GGCCGTCCGC
AAGCTCGAAG CGGATGTCCA GCGCTCCGCC GACACCCACC TGTTCAAGCT CGAGCTGCCC
GGACTGCGCG GCGTGGACCT CTATCTCAAG GACGAGAGCA CACACCCTAC CGGCAGCCTG
AAACACCGGC TGGCGCGATC CCTGTTCCTC TACGCGCTCT GCAACGGCCA GCTGTGCGCA
GGCCGCCCGG TGATCGAGGC CTCCTCCGGC AGCACCGCGG TGTCCGAGGC CTATTTCGCC
CAGATGCTCG GCCTGCCCTT CATCGCGGTG ATGCCGCGCA GGACCGCGCG CAGCAAGATC
GCCGAGATCA CGCGCTTCGG CGGCACCTGC CATTTCGTCG ACAGCGCGCC CGAGATGCAC
GCCGCCGCCA CCACACTCGC CGCAGAGACC GGCGGCTACT TCATGGACCA GTTCCTCTAT
GCCGAACGGG CGACGGACTG GCGCGGCAAC AACAACATCG CCGAGAGCAT CTTTCGCCAG
ATGGCGCGCG AACGCTTCCC CATCCCCGCC GCCCTGGTGA TGAGCGCGGG CACCGGCGGG
ACCTCGGCCA CCCTGGGGCG ATACATCCGC TACCGGGGCT TCGAGACGCA GCTGGTGGTG
GTCGATCCCG AGAACTCGGT GTTCTACGAC AGCTACATGA GCGGGGATGC CACGCTCAGC
CGGGCCTGCT CCAGCCGGAT CGAGGGGATC GGGCGACCCA TCGTGGAGAA ATCCTTTCAG
CCCGACGTGA TCGACACCAT GCTGCAGGTG CCCGATACCG CCAGCGTCGC CACCGCCCTG
TGGCTGTCGG ACCGGATCGG GCGCAAGGTG GGCGGGTCCA CGGGCACGAA CCTCTGGGGC
GCACTGCAGA TCGCGGACCG GATGCAGGCG GCAGGCACCG AAGGCTCGAT CGTCACGGTG
ATGTGCGACG CCGGGGAGCG GTATCTCGAC ACCTATCACG ACCCGGACTG GGTGGCGCGG
GAGATCGGCG ATATCGGGCC TGCGTGCGCC GCGCTCGCCC GCTGGGACCG GCACGCGGGC
TGA
 
Protein sequence
MQGAWQGRCN GLGRRRGRGS HRVQLSAAAS TRDWVAEAVR KLEADVQRSA DTHLFKLELP 
GLRGVDLYLK DESTHPTGSL KHRLARSLFL YALCNGQLCA GRPVIEASSG STAVSEAYFA
QMLGLPFIAV MPRRTARSKI AEITRFGGTC HFVDSAPEMH AAATTLAAET GGYFMDQFLY
AERATDWRGN NNIAESIFRQ MARERFPIPA ALVMSAGTGG TSATLGRYIR YRGFETQLVV
VDPENSVFYD SYMSGDATLS RACSSRIEGI GRPIVEKSFQ PDVIDTMLQV PDTASVATAL
WLSDRIGRKV GGSTGTNLWG ALQIADRMQA AGTEGSIVTV MCDAGERYLD TYHDPDWVAR
EIGDIGPACA ALARWDRHAG