Gene Dshi_2944 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_2944 
Symbol 
ID5710795 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp3103635 
End bp3104450 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content71% 
IMG OID641268870 
Producthypothetical protein 
Protein accessionYP_001534278 
Protein GI159045484 
COG category[S] Function unknown 
COG ID[COG3921] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.0362453 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGGCGG CGCGGATCGG GATGCTGGGG GCGCTGGTGC TTGCGCTCGC CTCTCCCGCG 
GCCGCGCTCG ACCGTTCGCC CCATCCAACG CCGCGGGCCG AAGCCCTGAT CCTTGCCCAG
GTGGGCGCGC GGCTTGCCCC CGCGCCCCGC GCGGCCCCCG AAACCGCCAC CGAGCCTGCG
CTGGGTCAGG CGGGGGGACT TCGTCTCTCT CCCCATCCCG CGCCGCGGGG GGCGTTCGTG
CCGCGCCAGG TGTCGCGCGA AGTCACCCGT CCCCCGGGCG GGCCGTCGAA AATCGGTCGC
ATCTGCGGCA GCCGCAAGAT CCTGGGACGC ACGGCATCGT CGATCCCCGG CACCCTGCCC
GGATGCGGGG TGCGCAATCC GGTGCAGGTG GTCGAGGTGT CCGGCGTGCG CCTGTCCACG
GCGGCGACCA TGACCTGCGA GACCGCCGAG GCCCTGCGCA AATGGGTGGA TAACGGCGTC
AAGAAATCCG TGCGGCGCAC CGGTGGCGGG GTCGCGGAAC TGCGCGTCGC GGCCCATTAC
AGCTGCCGCA CCCGCAACCA TAAGCCCGGC GCGAAGATCT CGGAGCATGG CAAGGGCAAG
GCGATCGACA TCTCGGCCAT CGTGCTGAAG GACGGGACCG TGGTGACCTT GCAGAAGGGG
TGGAACGACC GCCGCTACGG CAAGATGTTG CGCCAGATGC ACAAGCGCGC CTGCGGGCCC
TTCGGCACCG TGCTCGGCCC CGAAAGCGAC CGGTTCCACA GGGATCATTT CCACTTCGAC
GTAGCCCGCC ACCGGGGCGG CCCCTACTGC CGCTAG
 
Protein sequence
MRAARIGMLG ALVLALASPA AALDRSPHPT PRAEALILAQ VGARLAPAPR AAPETATEPA 
LGQAGGLRLS PHPAPRGAFV PRQVSREVTR PPGGPSKIGR ICGSRKILGR TASSIPGTLP
GCGVRNPVQV VEVSGVRLST AATMTCETAE ALRKWVDNGV KKSVRRTGGG VAELRVAAHY
SCRTRNHKPG AKISEHGKGK AIDISAIVLK DGTVVTLQKG WNDRRYGKML RQMHKRACGP
FGTVLGPESD RFHRDHFHFD VARHRGGPYC R