Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_2941 |
Symbol | |
ID | 5710792 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | - |
Start bp | 3100657 |
End bp | 3101940 |
Gene Length | 1284 bp |
Protein Length | 427 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641268867 |
Product | hypothetical protein |
Protein accession | YP_001534275 |
Protein GI | 159045481 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.0937923 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAAATC CGGCAATGCG GGCCCGACCG TCCTTCAGTC GGCCCACACG GCAGCTTCTG CTGATGCTGC TCGTCCTGGT CCTGGTGGGG ATCGGGGGGT GGGTGGCCTA TCCGCGGGTC GCGCCGATCT TCCTTGCCAA TCCCTATCTC AACGGGGTGA TCGTTCTGGT CTTTGTGGTG GGGCTCATGT CCTGCCTGGC GCAGCTTTAC CAGCTTTCGG CGGCGACGCG CTGGATCGAG GGGTTTGCCA ACAACGTGCC GACGGCCACC CGGGACACCG CGCCGCGGCT GGTGGGGACG CTGGCGAACC TGCTGGGCGC GCGCAAGGCG CGGATGCAGC TCAGCGCGAA CTCGTCGCGC TCCATCCTCG ATTCCGTGGC CACCCGGATC GACGAGGCGC GCGACATCAC GCGTTATATC GTCAACCTTC TGATCTTTCT GGGCCTTCTC GGCACGTTTT ACGGCCTTGC CACCACGGTG CCCGCGGTGG TCGACACGAT CCGCTCCCTC GATCCGTCCG AAGGCGAGGG CGGGGTGGCG GTGTTTTCCC GCCTGATGAC GGGGCTGGAG GCGCAGCTGG GCGGGATGGG TACGGCGTTC GCCTCGTCGC TGCTGGGTCT TGCGGGCTCG TTGGTTGTGG GGCTTTTGGA GCTCTTCGTG GGCCATGGCC AAAACCGGTT CTACCGGGAG CTGGAGGAAT GGCTGTCGAC CATCACCAAG GTCGGGTTCG CGTCGTCGGA GGTCGAGGGC GGCGGGTTCG ACATGGATAT CGTGGCCCAG GTGCTCGATC ACATGGTGGC GCAGATCGAG TCGCTGCAGG ACCTGTTCGT GCAATCGGAT GAACGGGCCA CGCGGCTCGA CCAGCGCCTC GTCGGGGTGG CGCAGTCGGT CACGGCGCTG ACCTCGCAGC TGGGGCGCAA CGACCAGACC ACCGAGGCGC TGGAACGGGT GGCCGCGGGC CAGGAACGGA TCGCCAACCT GCTGGAGCAG CAGATCACCG CGGGCGAGGG CGGCATCGAC GCCGAAAGCC GGATGCGCCT GCGCAGCATC GATGTGCAGC TTCTGCGGAT CTTCGAGGAG ATGTCCGCCG GACGGCAGGA AACCGTGGCG GAGTTGCGCG GCGATCTCGC CTCGCTGAAC ATGACGGTGA AACAGGCCGC GCGCGCGGGC GACCCGGCGG CCGTGGCGGC AGAGGCCCTG CGCACCGTCC TGCACGACGA TTTCGACCCG CAGGATGCGT TCCAGCGGGC CCGCCGCCCG GGCGATCCCC CGGAAGAGCG CTGA
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Protein sequence | MENPAMRARP SFSRPTRQLL LMLLVLVLVG IGGWVAYPRV APIFLANPYL NGVIVLVFVV GLMSCLAQLY QLSAATRWIE GFANNVPTAT RDTAPRLVGT LANLLGARKA RMQLSANSSR SILDSVATRI DEARDITRYI VNLLIFLGLL GTFYGLATTV PAVVDTIRSL DPSEGEGGVA VFSRLMTGLE AQLGGMGTAF ASSLLGLAGS LVVGLLELFV GHGQNRFYRE LEEWLSTITK VGFASSEVEG GGFDMDIVAQ VLDHMVAQIE SLQDLFVQSD ERATRLDQRL VGVAQSVTAL TSQLGRNDQT TEALERVAAG QERIANLLEQ QITAGEGGID AESRMRLRSI DVQLLRIFEE MSAGRQETVA ELRGDLASLN MTVKQAARAG DPAAVAAEAL RTVLHDDFDP QDAFQRARRP GDPPEER
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