Gene Dshi_2941 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_2941 
Symbol 
ID5710792 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp3100657 
End bp3101940 
Gene Length1284 bp 
Protein Length427 aa 
Translation table11 
GC content68% 
IMG OID641268867 
Producthypothetical protein 
Protein accessionYP_001534275 
Protein GI159045481 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.0937923 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAATC CGGCAATGCG GGCCCGACCG TCCTTCAGTC GGCCCACACG GCAGCTTCTG 
CTGATGCTGC TCGTCCTGGT CCTGGTGGGG ATCGGGGGGT GGGTGGCCTA TCCGCGGGTC
GCGCCGATCT TCCTTGCCAA TCCCTATCTC AACGGGGTGA TCGTTCTGGT CTTTGTGGTG
GGGCTCATGT CCTGCCTGGC GCAGCTTTAC CAGCTTTCGG CGGCGACGCG CTGGATCGAG
GGGTTTGCCA ACAACGTGCC GACGGCCACC CGGGACACCG CGCCGCGGCT GGTGGGGACG
CTGGCGAACC TGCTGGGCGC GCGCAAGGCG CGGATGCAGC TCAGCGCGAA CTCGTCGCGC
TCCATCCTCG ATTCCGTGGC CACCCGGATC GACGAGGCGC GCGACATCAC GCGTTATATC
GTCAACCTTC TGATCTTTCT GGGCCTTCTC GGCACGTTTT ACGGCCTTGC CACCACGGTG
CCCGCGGTGG TCGACACGAT CCGCTCCCTC GATCCGTCCG AAGGCGAGGG CGGGGTGGCG
GTGTTTTCCC GCCTGATGAC GGGGCTGGAG GCGCAGCTGG GCGGGATGGG TACGGCGTTC
GCCTCGTCGC TGCTGGGTCT TGCGGGCTCG TTGGTTGTGG GGCTTTTGGA GCTCTTCGTG
GGCCATGGCC AAAACCGGTT CTACCGGGAG CTGGAGGAAT GGCTGTCGAC CATCACCAAG
GTCGGGTTCG CGTCGTCGGA GGTCGAGGGC GGCGGGTTCG ACATGGATAT CGTGGCCCAG
GTGCTCGATC ACATGGTGGC GCAGATCGAG TCGCTGCAGG ACCTGTTCGT GCAATCGGAT
GAACGGGCCA CGCGGCTCGA CCAGCGCCTC GTCGGGGTGG CGCAGTCGGT CACGGCGCTG
ACCTCGCAGC TGGGGCGCAA CGACCAGACC ACCGAGGCGC TGGAACGGGT GGCCGCGGGC
CAGGAACGGA TCGCCAACCT GCTGGAGCAG CAGATCACCG CGGGCGAGGG CGGCATCGAC
GCCGAAAGCC GGATGCGCCT GCGCAGCATC GATGTGCAGC TTCTGCGGAT CTTCGAGGAG
ATGTCCGCCG GACGGCAGGA AACCGTGGCG GAGTTGCGCG GCGATCTCGC CTCGCTGAAC
ATGACGGTGA AACAGGCCGC GCGCGCGGGC GACCCGGCGG CCGTGGCGGC AGAGGCCCTG
CGCACCGTCC TGCACGACGA TTTCGACCCG CAGGATGCGT TCCAGCGGGC CCGCCGCCCG
GGCGATCCCC CGGAAGAGCG CTGA
 
Protein sequence
MENPAMRARP SFSRPTRQLL LMLLVLVLVG IGGWVAYPRV APIFLANPYL NGVIVLVFVV 
GLMSCLAQLY QLSAATRWIE GFANNVPTAT RDTAPRLVGT LANLLGARKA RMQLSANSSR
SILDSVATRI DEARDITRYI VNLLIFLGLL GTFYGLATTV PAVVDTIRSL DPSEGEGGVA
VFSRLMTGLE AQLGGMGTAF ASSLLGLAGS LVVGLLELFV GHGQNRFYRE LEEWLSTITK
VGFASSEVEG GGFDMDIVAQ VLDHMVAQIE SLQDLFVQSD ERATRLDQRL VGVAQSVTAL
TSQLGRNDQT TEALERVAAG QERIANLLEQ QITAGEGGID AESRMRLRSI DVQLLRIFEE
MSAGRQETVA ELRGDLASLN MTVKQAARAG DPAAVAAEAL RTVLHDDFDP QDAFQRARRP
GDPPEER