Gene Dshi_2938 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_2938 
Symbol 
ID5710789 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp3095104 
End bp3095874 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content67% 
IMG OID641268864 
Productconserved hypohtetical protein 
Protein accessionYP_001534272 
Protein GI159045478 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0406539 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.0314304 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGATCAA CTGAAAGTGC GCCTGTGCAT CTCGACGTTC TGGATTTGCG GCAATTCTAT 
TATCGCACCC GTCTCGGCCG CGTGGCGCAG GGTGCGATCC GCGATGCGTT GCTGTATCAC
TGGCCCGATG CCGAGGGGCA GACCGTGGTC GGCTTCGGCT TCGCCGTGCC GCTGTTGCGA
CCCTACCTGA CCGATGCGCG GCGCGTGATC GGGCTGATGC CCGGGCCGCA GGGGGTGATG
CATTGGCCGG CGGGAATGCC GAATATCTCG GTTCTGTGCG ACGAACGCTC CTGGCCGCTT
GAGACCGGCG GCGTGGACAA ACTGGTTCTG CTGCATGGGC TGGAGACGTC CGAGACCCCC
ACGGATCTGC TGGAAGAATG CTGGCGGGTG CTGTCTCCGG GCGGGCGGGC GATGTTCATC
GTGCCCAACC GCGCGGGGCT CTGGGCGCGC AAGGACGGCA CGCCGTTCGG GTATGGCCGC
CCCTACAGTC TCGGGCAACT TGAGGCGCAA CTGACCAAGC ACGGATTTGT CAACGAACGC
CACGCCAGCG CGCTCTTCAC CCCGCCGAGC GAGAAGCGCT TCTGGCTGCG ATCCACGCGG
ATGGTCGAGA AAACCGGGCA GAACCTGTCG GCGGTGCTGG GCGGGGGGGT GTTCCTGGTG
GAGGTGTCCA AGCAGGTGTT CGAGCCGCTG AAAGCCGACC GGTCCAAGGG ACTGCGGCGG
CCGTTGCGGG TGCTGGAGGG GATCCCCGCG CCGGGCGCGA AACCGGTCTG A
 
Protein sequence
MRSTESAPVH LDVLDLRQFY YRTRLGRVAQ GAIRDALLYH WPDAEGQTVV GFGFAVPLLR 
PYLTDARRVI GLMPGPQGVM HWPAGMPNIS VLCDERSWPL ETGGVDKLVL LHGLETSETP
TDLLEECWRV LSPGGRAMFI VPNRAGLWAR KDGTPFGYGR PYSLGQLEAQ LTKHGFVNER
HASALFTPPS EKRFWLRSTR MVEKTGQNLS AVLGGGVFLV EVSKQVFEPL KADRSKGLRR
PLRVLEGIPA PGAKPV