| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2936 |
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| Symbol | atpA1 |
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| ID | 5710787 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 3092718 |
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| End bp | 3094256 |
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| Gene Length | 1539 bp |
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| Protein Length | 512 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641268862 |
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| Product | F0F1 ATP synthase subunit alpha |
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| Protein accession | YP_001534270 |
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| Protein GI | 159045476 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0056] F0F1-type ATP synthase, alpha subunit |
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| TIGRFAM ID | [TIGR00962] proton translocating ATP synthase, F1 alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.147396 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.0629902 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGAATCC AAGCTGCCGA AATCTCTGCG ATCCTCAAGG AGCAGATCAA GAACTTTGGC
CAGGAAGCCG AAGTCGCCGA GGTGGGCCGC GTGCTCAGCG TCGGCGACGG GATTGCACGG
GTCCACGGGC TGGACAACGT GCAGGCCGGT GAAATGGTCG AGTTCCCGGG CGGCATCCGC
GGGATGGCCC TGAACCTCGA AATCGACAAT GTGGGTGTCG TGATCTTCGG CTCGGACCGG
GACATCAAGG AAGGCGACAT CGTCAAGCGC ACCAAGTCCA TCGTGGACGT GCCCGTGGGC
GACGCGCTGC TGGGCCGGGT CGTGGATGGC CTGGGCAACC CGCTGGACGG CAAGGGCCCG
ATCGAGACCA CCGAGCGCAG CATCGCGGAC GTGAAGGCGC CGGGCATCAT CCCGCGCAAA
TCCGTGCATG AGCCGATGGC GACCGGCCTG AAATCTGTCG ACGCCATGAT CCCGATCGGG
CGCGGCCAGC GCGAGCTGAT CATCGGCGAC CGCCAGACCG GCAAGACCGC CGTGGCGCTC
GACACGATCC TGAACCAGAA GGCCTATAAC GACGCCGCCG GCGACGACGA GAGCAAGAAG
CTCTACTGCG TCTACGTGGC CGTGGGGCAG AAGCGCTCCA CCGTGGCGCA GCTGGTCAAG
AAGCTCGAAG AAACTGGTGC CATCGAATAC TCCATCGTCG TGGCCGCCAC CGCCTCCGAC
CCGGCGCCGA TGCAGTTCCT CGCACCCTAT GCCGCGACCT CCATGGCGGA ATTCTTCCGC
GACAATGGCC GCCATGCGCT GATCATCTAT GATGACCTCT CGAAGCAGGC CGTGTCTTAC
CGTCAGATGT CGCTGCTGCT GCGTCGCCCG CCGGGCCGCG AAGCCTATCC GGGCGACGTG
TTCTACCTGC ACTCCCGCCT GCTGGAGCGG TCGGCGAAGC TGGGCGACGA TCATGGCAAC
GGGTCGCTGA CCGCGCTGCC GATCATCGAA ACGCAAGGCG GCGACGTGTC GGCCTTTATC
CCGACCAACG TGATCTCGAT CACCGACGGC CAGATCTTCC TGGAAACCGA GCTGTTCTAC
CAGGGCATCC GCCCCGCCGT GAACACCGGT CTGTCGGTGT CGCGCGTGGG CTCCTCGGCC
CAGACCAACG CGATGAAATC CGTCGCTGGC CCGGTGAAGC TGGAACTGGC GCAGTACCGC
GAAATGGCGG CCTTCGCGCA GTTCGGCTCC GACCTCGACG CCGCCACACA GCAGCTGCTG
AACCGTGGTG CGCGCCTGAC CGAGCTGATG AAGCAGCCGC AATACTCGCC GCTGACCAAT
GCCGAGATCG TCTGCGTGAT CTTCGCCGGC ACCAAGGGCT ACCTCGACAA GATCCCCGTG
GGGGACGTGG GCCGTTACGA GAAGGGCCTG CTGGCGCACC TGCGCGGCAA GCACAAGGGC
CTGCTGGACT ACATCACCAA GGAAGATCCC AAGATCAAGG GTGAGGCCGA AGACAAGATC
CGCGCAGCGC TCGACGAATT CGCCGCGACC TTCGCGTAA
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| Protein sequence | MGIQAAEISA ILKEQIKNFG QEAEVAEVGR VLSVGDGIAR VHGLDNVQAG EMVEFPGGIR
GMALNLEIDN VGVVIFGSDR DIKEGDIVKR TKSIVDVPVG DALLGRVVDG LGNPLDGKGP
IETTERSIAD VKAPGIIPRK SVHEPMATGL KSVDAMIPIG RGQRELIIGD RQTGKTAVAL
DTILNQKAYN DAAGDDESKK LYCVYVAVGQ KRSTVAQLVK KLEETGAIEY SIVVAATASD
PAPMQFLAPY AATSMAEFFR DNGRHALIIY DDLSKQAVSY RQMSLLLRRP PGREAYPGDV
FYLHSRLLER SAKLGDDHGN GSLTALPIIE TQGGDVSAFI PTNVISITDG QIFLETELFY
QGIRPAVNTG LSVSRVGSSA QTNAMKSVAG PVKLELAQYR EMAAFAQFGS DLDAATQQLL
NRGARLTELM KQPQYSPLTN AEIVCVIFAG TKGYLDKIPV GDVGRYEKGL LAHLRGKHKG
LLDYITKEDP KIKGEAEDKI RAALDEFAAT FA
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