| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2933 |
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| Symbol | atpC1 |
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| ID | 5710784 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 3089986 |
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| End bp | 3090381 |
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| Gene Length | 396 bp |
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| Protein Length | 131 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641268859 |
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| Product | ATP synhtase epsilon chain |
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| Protein accession | YP_001534267 |
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| Protein GI | 159045473 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0355] F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) |
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| TIGRFAM ID | [TIGR01216] ATP synthase, F1 epsilon subunit (delta in mitochondria) |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.187762 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.0186887 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCAAACA CCCTGCAATT CGATCTCGTC AGCCCCGAGC GGAGCCTTGC TTCGCTCGAG
GTGACCGAGG TCCAGATCCC TGCGGCCGAT GGGGACATGA CGGCGATGGC CGATCATGCG
CCGACCATCA CGACCCTGCG CCCAGGCATC CTGACGGCCG TCGGGCCGTC GGGGCGCGAG
AGCTTCGCGG TCACCGGCGG CTTTGCCGAG ATCAGCGCCG AGGGCACCAC GGTTCTGGCT
GAGCGGGCCT ATCCCGCCGG GGCCGATGCC CGTGCCGCAC TCGAAGAGCA TCTCGAAGCG
GCGCGCGCCA AGGCGAGCGA AGCGCAAGGC GAGCATAAGG ACGTGGCCGA GAAGCTGGTC
GACGACATGG TCAAGCTGCT CGCCGACATG GTCTGA
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| Protein sequence | MANTLQFDLV SPERSLASLE VTEVQIPAAD GDMTAMADHA PTITTLRPGI LTAVGPSGRE
SFAVTGGFAE ISAEGTTVLA ERAYPAGADA RAALEEHLEA ARAKASEAQG EHKDVAEKLV
DDMVKLLADM V
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